AAL22051 (STM3177, ygiX)

Aliases : STM3177, ygiX

Description : putative transcriptional regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL22051
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AAC73502	phoB, b0399	response regulator in two-component regulatory system...	0.04	OrthoFinder
AAC74680	rstA, b1608	response regulator of RstAB two-component system...	0.05	OrthoFinder
AAC75035	hprR, b1969	response regulator family protein [Ensembl]....	0.05	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.09	OrthoFinder
AAC77074	basR, b4113	response regulator in two-component regulatory system...	0.05	OrthoFinder
AAK98880	spr0076, rr08	Response regulator [Ensembl]. Transcriptional regulatory...	0.02	OrthoFinder
AAL20028	STM1096, copR	Copper resistance transcriptional regulatory protein...	0.05	OrthoFinder
AGT25177	N559_3529, BasR	DNA-binding transcriptional regulator BasR [Ensembl]....	0.04	OrthoFinder
CBI67093	HPB8_1536	two-component system, OmpR family, response regulator...	0.01	OrthoFinder
CCG26613	CiaR	Two component system response regulator CiaR [Ensembl]....	0.02	OrthoFinder
CCG26924	No alias	Two-component system response regulator [Ensembl]....	0.03	OrthoFinder
CCL16989	BN171_1060003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL19656	BN171_3350005	Two-component response regulator [Ensembl]. Response...	0.04	OrthoFinder
CCL20055	BN171_3670038	Two-component response regulator, CheY family [Ensembl]....	0.03	OrthoFinder
CCL20132	BN171_370006	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL20251	BN171_390005	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCP43225	regX3, Rv0491	Two component sensory transduction protein RegX3...	0.02	OrthoFinder
CCP43651	prrA, Rv0903c	Two component response transcriptional regulatory...	0.01	OrthoFinder
CCP43777	kdpE, Rv1027c	Probable transcriptional regulatory protein KdpE...	0.02	OrthoFinder
CCP43784	trcR, Rv1033c	Two component transcriptional regulator TrcR [Ensembl]....	0.04	OrthoFinder
CPC31435	arlR, ERS093114_00002	Putative response regulator ArlR [Ensembl]....	0.06	OrthoFinder
CPC50543	saeR, ERS093114_00646	Response regulator SaeR [Ensembl]. Transcriptional...	0.02	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.08	OrthoFinder
CPC86428	phoP, ERS093114_01516	Alkaline phosphatase synthesis transcriptional...	0.02	OrthoFinder
CRN72185	baeR_1	Transcriptional regulatory protein BaeR [Ensembl]....	0.03	OrthoFinder
CRO24960	ompR_1	Transcriptional regulatory protein OmpR [Ensembl]....	0.03	OrthoFinder
CRO38230	rstA	Transcriptional regulatory protein RstA [Ensembl]....	0.04	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.1	OrthoFinder
CRO55563	arcA_1	Dye resistance protein [Ensembl]. Response regulator...	0.04	OrthoFinder
CRP18948	ompR_3	Transcriptional regulatory protein OmpR [Ensembl]....	0.03	OrthoFinder
CRP43486	qseB_3	Transcriptional regulatory protein QseB [Ensembl]....	0.05	OrthoFinder
CRP45027	ompR_4	Transcriptional regulatory protein OmpR [Ensembl]....	0.04	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.07	OrthoFinder
KNA55120	VCV51_031823	response regulator receiver domain-containing protein...	0.03	OrthoFinder
KNA58243	VCV51_032751	response regulator receiver domain-containing protein...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004673	protein histidine kinase activity	IEP	Enrichment
MF	GO:0008144	drug binding	IEP	Enrichment
MF	GO:0008658	penicillin binding	IEP	Enrichment
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Enrichment
MF	GO:0031406	carboxylic acid binding	IEP	Enrichment
MF	GO:0033218	amide binding	IEP	Enrichment
MF	GO:0033293	monocarboxylic acid binding	IEP	Enrichment
MF	GO:0043177	organic acid binding	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment
MF	GO:0140299	small molecule sensor activity	IEP	Enrichment
MF	GO:1901681	sulfur compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	145	216
IPR001789	Sig_transdc_resp-reg_receiver	3	112

External Links

No external refs found!

AAL22051 (STM3177, ygiX)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation