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  5. AAL22172

AAL22172 (STM3303, rpmA)


Aliases : STM3303, rpmA

Description : 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal L27 protein [Interproscan].


Gene families : OG_02_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22172
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76217 rpmA, b3185 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal... 0.44 OrthoFinder
ADK87189 rpmA, MPNE_0380 ribosomal protein L27 [Ensembl]. Ribosomal L27 protein... 0.07 OrthoFinder
AEA93392 rpmA, OG1RF_10705 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.25 OrthoFinder
AGT22370 N559_0572 50S ribosomal protein L27 [Ensembl]. 0.11 OrthoFinder
AHY39368 rpmA, CJ8421_00485 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.1 OrthoFinder
AKI49537 rpmA, L2625_01642 ribosomal protein L27 [Ensembl]. Ribosomal protein L27... 0.19 OrthoFinder
AKP14816 rpmA, WX61_00744 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.03 OrthoFinder
CBI66822 rpmA, HPB8_1265 large subunit ribosomal protein L27 [Ensembl]. Ribosomal... 0.09 OrthoFinder
CCG26585 No alias LSU ribosomal protein L27p [Ensembl]. Ribosomal L27... 0.13 OrthoFinder
CCL17313 rpmA, BN171_1430040 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.06 OrthoFinder
CCP45234 rpmA, Rv2441c 50S ribosomal protein L27 RpmA [Ensembl]. Ribosomal L27... 0.09 OrthoFinder
CPC84847 rpmA, ERS093114_01475 50S ribosomal protein L25 [Ensembl]. Ribosomal L27... 0.4 OrthoFinder
CRN65841 rpmA 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.25 OrthoFinder
EDJ91659 rpmA, CGSHi22421_07888 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.06 OrthoFinder
KNA50265 VCV51_033696 ribosomal L27 protein [Ensembl]. Ribosomal L27 protein... 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 2 82
No external refs found!