1. Home
  2. Species
  3. Salmonella enterica
  4. Sequence
  5. AAL22213

AAL22213 (STM3344, rpsI)


Aliases : STM3344, rpsI

Description : 30S ribosomal subunit protein S9 [Ensembl]. Ribosomal protein S9/S16 [Interproscan].


Gene families : OG_02_0000559 (OrthoFinder) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22213
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76262 rpsI, b3230 30S ribosomal subunit protein S9 [Ensembl]. Ribosomal... 0.44 OrthoFinder
AAK99076 spr0272, rpsI 30S Ribosomal protein S9 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
ADK86926 rpsI, MPNE_0721 ribosomal protein S9 [Ensembl]. Ribosomal protein S9/S16... 0.06 OrthoFinder
AGT22336 N559_0534 30S ribosomal protein S9 [Ensembl]. 0.08 OrthoFinder
AHY40658 rpsI, CJ8421_07405 30S ribosomal protein S9 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
CBI67039 rpsI, HPB8_1482 small subunit ribosomal protein S9 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCG27316 No alias SSU ribosomal protein S9p (S16e) [Ensembl]. Ribosomal... 0.27 OrthoFinder
CCL20598 rpsI, BN171_70038 30S ribosomal protein S9 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
CCP46264 rpsI, Rv3442c 30S ribosomal protein S9 RpsI [Ensembl]. Ribosomal... 0.17 OrthoFinder
CPD14676 rpsI, ERS093114_02156 30S ribosomal protein S9 [Ensembl]. Ribosomal protein... 0.36 OrthoFinder
CRP09052 rpsI 30S ribosomal protein S9 [Ensembl]. Ribosomal protein... 0.27 OrthoFinder
EDJ91092 rpsI, CGSHi22421_10137 30S ribosomal protein S9 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
KNA51830 VCV51_033518 ribosomal protein S9/S16 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 10 130
No external refs found!