1. Home
  2. Species
  3. Salmonella enterica
  4. Sequence
  5. AAL22287

AAL22287 (STM3424, rplR)


Aliases : STM3424, rplR

Description : 50S ribosomal subunit protein L18 [Ensembl]. Ribosomal L18 of archaea [Interproscan].


Gene families : OG_02_0000945 (OrthoFinder) Phylogenetic Tree(s): OG0000945_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22287
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76329 rplR, b3304 50S ribosomal subunit protein L18 [Ensembl]. Ribosomal... 0.54 OrthoFinder
ADK86776 rplR, MPNE_0210 ribosomal protein L18 [Ensembl]. Ribosomal L18 of... 0.24 OrthoFinder
AGT22258 N559_0450 50S ribosomal protein L18 [Ensembl]. 0.27 OrthoFinder
AHY40876 rplR, CJ8421_08520 50S ribosomal protein L18 [Ensembl]. Ribosomal L18 of... 0.33 OrthoFinder
CBI65733 rplR, HPB8_176 large subunit ribosomal protein L18 [Ensembl]. Ribosomal... 0.22 OrthoFinder
CCP43464 rplR, Rv0720 50S ribosomal protein L18 RplR [Ensembl]. Ribosomal L18... 0.18 OrthoFinder
CPD14066 rplR, ERS093114_02138 50S ribosomal protein L18 [Ensembl]. Ribosomal L18 of... 0.36 OrthoFinder
CRO74217 rplR hypothetical protein [Ensembl]. Ribosomal L18 of archaea... 0.38 OrthoFinder
EDJ91372 rplR, CGSHi22421_04693 50S ribosomal protein L18 [Ensembl]. Ribosomal L18 of... 0.44 OrthoFinder
KNA54988 VCV51_033171 ribosomal protein L18 [Ensembl]. Ribosomal L18 of... 0.39 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 1 117
No external refs found!