AAL22289 (STM3426, rpsH)


Aliases : STM3426, rpsH

Description : 30S ribosomal subunit protein S8, and regulator [Ensembl]. Ribosomal protein S8 [Interproscan].


Gene families : OG_02_0000396 (OrthoFinder) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22289
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76331 rpsH, b3306 30S ribosomal subunit protein S8 [Ensembl]. Ribosomal... 0.58 OrthoFinder
AAK99007 spr0203, rpsH 30S Ribosomal protein S8 (S8) [Ensembl]. Ribosomal... 0.14 OrthoFinder
ADK87107 rpsH, MPNE_0208 ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.18 OrthoFinder
AEA92852 rpsH, OG1RF_10165 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.3 OrthoFinder
AGT22256 N559_0448 30S ribosomal protein S8 [Ensembl]. 0.19 OrthoFinder
AHY40878 rpsH, CJ8421_08530 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.33 OrthoFinder
AKI50553 rpsH, L2625_02763 ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.19 OrthoFinder
AKP15137 rpsH, WX61_01083 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.14 OrthoFinder
CBI65731 rpsH, HPB8_174 small subunit ribosomal protein S8 [Ensembl]. Ribosomal... 0.19 OrthoFinder
CCG27393 S15Ae SSU ribosomal protein S8p (S15Ae) [Ensembl]. Ribosomal... 0.26 OrthoFinder
CCL20577 rpsH, BN171_70017 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.24 OrthoFinder
CCP43462 rpsH, Rv0718 30S ribosomal protein S8 RpsH [Ensembl]. Ribosomal... 0.23 OrthoFinder
CPD13989 rpsH, ERS093114_02136 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.34 OrthoFinder
CRO74158 rpsH 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.36 OrthoFinder
EDJ91370 rpsH, CGSHi22421_04683 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.38 OrthoFinder
KNA54986 VCV51_033169 ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.28 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 5 129
No external refs found!