AAL22296 (STM3433, rplP)


Aliases : STM3433, rplP

Description : 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal protein L16p/L10e [Interproscan].


Gene families : OG_02_0000399 (OrthoFinder) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22296
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76338 rplP, b3313 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal... 0.67 OrthoFinder
AAK99000 spr0196, rplP 50S Ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
ADK87106 rplP, MPNE_0201 ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
AEA92845 rplP, OG1RF_10158 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.32 OrthoFinder
AGT22249 N559_0441 50S ribosomal protein L16 [Ensembl]. 0.1 OrthoFinder
AHY40885 rplP, CJ8421_08565 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
AKI50560 rplP, L2625_02770 ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
AKP15130 rplP, WX61_01076 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
CBI65724 rplP, HPB8_167 large subunit ribosomal protein L16 [Ensembl]. Ribosomal... 0.27 OrthoFinder
CCG27386 No alias LSU ribosomal protein L16p (L10e) [Ensembl]. Ribosomal... 0.21 OrthoFinder
CCL20570 rplP, BN171_70010 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
CCP43452 rplP, Rv0708 50S ribosomal protein L16 RplP [Ensembl]. Ribosomal... 0.21 OrthoFinder
CPD13746 rplP, ERS093114_02129 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.38 OrthoFinder
CRO73962 rplP 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.38 OrthoFinder
EDJ91361 rpsC, CGSHi22421_04638 30S ribosomal protein S3 [Ensembl]. Ribosomal protein... 0.37 OrthoFinder
KNA54979 VCV51_033162 ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.4 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 4 131
No external refs found!