Aliases : STM3433, rplP
Description : 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal protein L16p/L10e [Interproscan].
Gene families : OG_02_0000399 (OrthoFinder) Phylogenetic Tree(s): OG0000399_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL22296 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76338 | rplP, b3313 | 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal... | 0.67 | OrthoFinder | |
AAK99000 | spr0196, rplP | 50S Ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.25 | OrthoFinder | |
ADK87106 | rplP, MPNE_0201 | ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.19 | OrthoFinder | |
AEA92845 | rplP, OG1RF_10158 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.32 | OrthoFinder | |
AGT22249 | N559_0441 | 50S ribosomal protein L16 [Ensembl]. | 0.1 | OrthoFinder | |
AHY40885 | rplP, CJ8421_08565 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.29 | OrthoFinder | |
AKI50560 | rplP, L2625_02770 | ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.26 | OrthoFinder | |
AKP15130 | rplP, WX61_01076 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.09 | OrthoFinder | |
CBI65724 | rplP, HPB8_167 | large subunit ribosomal protein L16 [Ensembl]. Ribosomal... | 0.27 | OrthoFinder | |
CCG27386 | No alias | LSU ribosomal protein L16p (L10e) [Ensembl]. Ribosomal... | 0.21 | OrthoFinder | |
CCL20570 | rplP, BN171_70010 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.29 | OrthoFinder | |
CCP43452 | rplP, Rv0708 | 50S ribosomal protein L16 RplP [Ensembl]. Ribosomal... | 0.21 | OrthoFinder | |
CPD13746 | rplP, ERS093114_02129 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.38 | OrthoFinder | |
CRO73962 | rplP | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.38 | OrthoFinder | |
EDJ91361 | rpsC, CGSHi22421_04638 | 30S ribosomal protein S3 [Ensembl]. Ribosomal protein... | 0.37 | OrthoFinder | |
KNA54979 | VCV51_033162 | ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.4 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
MF | GO:0003924 | GTPase activity | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016180 | Ribosomal_L10e/L16 | 4 | 131 |
No external refs found! |