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  5. AAL22300

AAL22300 (STM3437, rplB)


Aliases : STM3437, rplB

Description : 50S ribosomal subunit protein L2 [Ensembl]. Ribosomal Proteins L2 [Interproscan].


Gene families : OG_02_0000653 (OrthoFinder) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22300
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76342 rplB, b3317 50S ribosomal subunit protein L2 [Ensembl]. Ribosomal... 0.62 OrthoFinder
AAK98995 spr0191, rplB 50S Ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.32 OrthoFinder
ADK87182 rplB, MPNE_0197 ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2... 0.21 OrthoFinder
AHY40889 rplB, CJ8421_08585 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.34 OrthoFinder
AKI50564 rplB, L2625_02774 ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2,... 0.28 OrthoFinder
AKP15126 rplB, WX61_01072 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.16 OrthoFinder
CBI65720 rplB, HPB8_163 large subunit ribosomal protein L2 [Ensembl]. Ribosomal... 0.23 OrthoFinder
CCL20566 rplB, BN171_70006 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.28 OrthoFinder
CCP43448 rplB, Rv0704 50S ribosomal protein L2 RplB [Ensembl]. Ribosomal... 0.2 OrthoFinder
CPD13600 rplB, ERS093114_02125 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.4 OrthoFinder
CRO73845 rplB 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.27 OrthoFinder
EDJ91357 CGSHi22421_04618 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.33 OrthoFinder
KNA54975 VCV51_033158 ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2... 0.37 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 42 117
IPR022669 Ribosomal_L2_C 126 249
No external refs found!