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  5. AAL22303

AAL22303 (STM3440, rplC)


Aliases : STM3440, rplC

Description : 50S ribosomal subunit protein L3 [Ensembl]. Ribosomal protein L3 [Interproscan].


Gene families : OG_02_0000401 (OrthoFinder) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22303
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76345 rplC, b3320 50S ribosomal subunit protein L3 [Ensembl]. Ribosomal... 0.6 OrthoFinder
AAK98992 spr0188, rplC 50S Ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.3 OrthoFinder
ADK86699 rplC, MPNE_0194 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.2 OrthoFinder
AEA92838 rplC, OG1RF_10151 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.28 OrthoFinder
AGT22244 N559_0434 50S ribosomal protein L3 [Ensembl]. 0.27 OrthoFinder
AHY40892 rplC, CJ8421_08600 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.32 OrthoFinder
AKI50567 rplC, L2625_02777 ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.2 OrthoFinder
AKP15123 rplC, WX61_01069 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.08 OrthoFinder
CBI65717 rplC, HPB8_160 large subunit ribosomal protein L3 [Ensembl]. Ribosomal... 0.16 OrthoFinder
CCG27379 No alias LSU ribosomal protein L3p (L3e) [Ensembl]. Ribosomal... 0.13 OrthoFinder
CCL20563 rplC, BN171_70003 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.27 OrthoFinder
CCP43445 rplC, Rv0701 50S ribosomal protein L3 RplC [Ensembl]. Ribosomal... 0.17 OrthoFinder
CPD13496 rplC, ERS093114_02122 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.34 OrthoFinder
CRO73740 rplC 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.27 OrthoFinder
EDJ91354 CGSHi22421_04603 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha... 0.3 OrthoFinder
KNA54972 VCV51_033155 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... 0.4 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032506 cytokinetic process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090529 cell septum assembly IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 34 182
No external refs found!