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  5. AAL22740

AAL22740 (STM3882, rbsA)


Aliases : STM3882, rbsA

Description : D-ribose high-affinity transport protein [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22740
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC74586 lsrA, b1513 autoinducer 2 import ATP-binding protein [Ensembl]. ABC... 0.08 OrthoFinder
AAC75210 mglA, b2149 methyl-galactoside ABC transporter ATPase [Ensembl]. ABC... 0.05 OrthoFinder
AAC76591 xylG, b3567 D-xylose ABC transporter dual domain ATPase [Ensembl].... 0.05 OrthoFinder
AAC76772 rbsA, b3749 D-ribose ABC transporter ATPase [Ensembl]. ABC... 0.11 OrthoFinder
AAC77048 alsA, b4087 D-allose ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAT48244 ytfR, b4485 putative sugar ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AGT22040 N559_0218 xylose transporter ATP-binding subunit [Ensembl]. 0.03 OrthoFinder
AGT23413 N559_1669 galactose/methyl galaxtoside transporter ATP-binding... 0.03 OrthoFinder
AGT23597 N559_1864 L-arabinose transporter ATP-binding protein [Ensembl]. 0.03 OrthoFinder
AGT25370 N559_3732 putative ribose ABC transport system ATP-binding... 0.06 OrthoFinder
AGT25474 N559_3838 putative ABC transporter [Ensembl]. 0.04 OrthoFinder
AGT26148 N559_4545 putative inner-membrane translocator [Ensembl]. 0.05 OrthoFinder
AGT26395 N559_4805 putative ABC transporter [Ensembl]. 0.04 OrthoFinder
AGT26647 N559_5070 rhamnose ABC transport system ATP-binding component [Ensembl]. 0.04 OrthoFinder
AGT26698 N559_5124 D-ribose transporter ATP binding protein [Ensembl]. 0.09 OrthoFinder
CCL18507 rbsA, BN171_240012 ABC-type transport system, ribose-specific ATP-binding... 0.04 OrthoFinder
CRN86529 araG Arabinose import ATP-binding protein AraG [Ensembl]. ABC... 0.08 OrthoFinder
EDJ91404 CGSHi22421_04853 fused methyl-galactoside transporter subunit of ABC... 0.06 OrthoFinder
EDJ91908 CGSHi22421_09133 D-xylose ABC transporter ATP-binding protein [Ensembl].... 0.04 OrthoFinder
KNA60663 VCV51_032102 ribose ABC transporter ATP-binding protein [Ensembl].... 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
MF GO:0005351 carbohydrate:proton symporter activity IEP Enrichment
MF GO:0005402 carbohydrate:cation symporter activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0009267 cellular response to starvation IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015295 solute:proton symporter activity IEP Enrichment
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP Enrichment
MF GO:0015649 2-keto-3-deoxygluconate:proton symporter activity IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0031667 response to nutrient levels IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
BP GO:0031669 cellular response to nutrient levels IEP Enrichment
BP GO:0034219 carbohydrate transmembrane transport IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0042594 response to starvation IEP Enrichment
BP GO:0046411 2-keto-3-deoxygluconate transmembrane transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 22 169
IPR003439 ABC_transporter-like_ATP-bd 269 423
No external refs found!