AAL22821 (STM3977, rfaH)


Aliases : STM3977, rfaH

Description : transcriptional activator [Ensembl]. Transcription termination factor nusG [Interproscan].


Gene families : OG_02_0002952 (OrthoFinder) Phylogenetic Tree(s): OG0002952_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22821
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AGT26537 N559_4953, RfaH transcriptional activator RfaH [Ensembl]. 0.05 OrthoFinder
KNA56424 VCV51_030693, RfaH transcriptional activator RfaH [Ensembl]. Transcription... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006645 NGN_dom 3 96
No external refs found!