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  5. AAL22977

AAL22977 (STM4149, rplK)


Aliases : STM4149, rplK

Description : 50 S ribosomal subunit protein L11 [Ensembl]. Ribosomal protein L11 [Interproscan].


Gene families : OG_02_0000363 (OrthoFinder) Phylogenetic Tree(s): OG0000363_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22977
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76957 rplK, b3983 50S ribosomal subunit protein L11 [Ensembl]. Ribosomal... 0.47 OrthoFinder
AAK99359 spr0555, rplK 50S Ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
ADK86752 rplK, MPNE_0251 ribosomal protein L11 [Ensembl]. Ribosomal protein L11... 0.17 OrthoFinder
AEA94770 rplK, OG1RF_12083 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AGT26521 N559_4937 50S ribosomal protein L11 [Ensembl]. RNA binding domain,... 0.22 OrthoFinder
AHY39727 rplK, CJ8421_02370 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
AKI48215 rplK, L2625_00265 ribosomal protein L11 [Ensembl]. Ribosomal protein L11... 0.08 OrthoFinder
AKP15107 rplK, WX61_01053 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder
CBI65846 rplK, HPB8_289 large subunit ribosomal protein L11 [Ensembl]. Ribosomal... 0.05 OrthoFinder
CCG26741 No alias LSU ribosomal protein L11p (L12e) [Ensembl]. Ribosomal... 0.11 OrthoFinder
CCL20639 rplK, BN171_80004 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
CCP43383 rplK, Rv0640 50S ribosomal protein L11 RplK [Ensembl]. Ribosomal... 0.16 OrthoFinder
CPC57428 rplK, ERS093114_00842 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.4 OrthoFinder
CRO73449 rplK 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.34 OrthoFinder
EDJ91477 CGSHi22421_06897 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
KNA49132 VCV51_033812 ribosomal protein L11 [Ensembl]. Ribosomal protein L11... 0.34 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032506 cytokinetic process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090529 cell septum assembly IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 2 67
IPR020783 Ribosomal_L11_C 72 140
No external refs found!