1. Home
  2. Species
  3. Salmonella enterica
  4. Sequence
  5. AAL22980

AAL22980 (STM4152, rplL)


Aliases : STM4152, rplL

Description : 50S ribosomal subunit protein L7/L12 [Ensembl]. Ribosomal protein L7/L12 C-terminal domain, Ribosomal protein L7/L12 dimerisation domain [Interproscan].


Gene families : OG_02_0000364 (OrthoFinder) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22980
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76960 rplL, b3986 50S ribosomal subunit protein L7/L12 [Ensembl].... 0.29 OrthoFinder
AAL00015 spr1211, rplL 50S Ribosomal protein L12 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
ADK86807 rplL, MPNE_0637 ribosomal protein L7/L12 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
AEA94767 rplL2, OG1RF_12080 ribosomal protein L7/L12 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
AGT26518 N559_4934 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.26 OrthoFinder
AHY39730 rplL, CJ8421_02385 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.15 OrthoFinder
AKI48218 rplL, L2625_00269 ribosomal protein L7/L12 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
AKP15110 rplL, WX61_01056 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.15 OrthoFinder
CBI65849 rplL, HPB8_292 large subunit ribosomal protein L7/L12 [Ensembl].... 0.22 OrthoFinder
CCG27670 P1/P2 LSU ribosomal protein L7/L12 (P1/P2) [Ensembl].... 0.15 OrthoFinder
CCL20642 rplL, BN171_80007 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.15 OrthoFinder
CCP43395 rplL, Rv0652 50S ribosomal protein L7/L12 RplL (SA1) [Ensembl].... 0.13 OrthoFinder
CPC57334 rplL, ERS093114_00838 50S ribosomalprotein L7/L12 (L23e) [Ensembl]. Ribosomal... 0.38 OrthoFinder
CRO73528 rplL Ribosomal protein 'A' [Ensembl]. Ribosomal protein... 0.4 OrthoFinder
EDJ90229 rplL, CGSHi22421_05057 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.1 OrthoFinder
KNA49129 VCV51_030231 ribosomal protein L7/L12 [Ensembl]. Ribosomal protein... 0.4 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 55 121
IPR008932 Ribosomal_L7/L12_oligo 4 50
No external refs found!