AAL23237 (STM4417)

Aliases : STM4417

Description : putative transcriptional regulator [Ensembl]. SIS domain, Helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL23237
Cluster	HCCA: Cluster_24

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097367	carbohydrate derivative binding	IEA	Interproscan
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	IEA	Interproscan
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	Enrichment
MF	GO:0004089	carbonate dehydratase activity	IEP	Enrichment
MF	GO:0004129	cytochrome-c oxidase activity	IEP	Enrichment
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Enrichment
MF	GO:0004252	serine-type endopeptidase activity	IEP	Enrichment
MF	GO:0005507	copper ion binding	IEP	Enrichment
BP	GO:0006952	defense response	IEP	Enrichment
BP	GO:0006955	immune response	IEP	Enrichment
BP	GO:0009307	DNA restriction-modification system	IEP	Enrichment
BP	GO:0009605	response to external stimulus	IEP	Enrichment
BP	GO:0009607	response to biotic stimulus	IEP	Enrichment
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	Enrichment
BP	GO:0043207	response to external biotic stimulus	IEP	Enrichment
BP	GO:0043900	regulation of multi-organism process	IEP	Enrichment
BP	GO:0044355	clearance of foreign intracellular DNA	IEP	Enrichment
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
BP	GO:0046999	regulation of conjugation	IEP	Enrichment
BP	GO:0051707	response to other organism	IEP	Enrichment
BP	GO:0098542	defense response to other organism	IEP	Enrichment
BP	GO:0099046	clearance of foreign intracellular nucleic acids	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001347	SIS_dom	144	270
IPR000281	HTH_RpiR	12	81

External Links

No external refs found!

AAL23237 (STM4417)

Expression Profile

Co-expression Networks

Functional Annotation