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AAL23356 (STM4538)


Aliases : STM4538

Description : putative PTS permease [Ensembl]. PTS system mannose/fructose/sorbose family IID component [Interproscan].


Gene families : OG_02_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL23356
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAC76174 agaD, b3140 N-acetylgalactosamine-specific enzyme IID component of... 0.06 OrthoFinder
AAK99063 spr0259, manN Phosphotransferase system, mannose-specific EIID... 0.03 OrthoFinder
AAK99099 spr0295, PTS-EII Phosphotransferase system sugar-specific EII component... 0.03 OrthoFinder
AAL00769 spr1967, PTS-EII Phosphotransferase system sugar-specific EII component... 0.03 OrthoFinder
AAL19525 STM0574 putative transport protein, PTS system [Ensembl]. PTS... 0.07 OrthoFinder
AEA92708 OG1RF_10021 PTS family mannose/fructose/sorbose porter component IID... 0.06 OrthoFinder
AEA94300 OG1RF_11613 PTS family mannose/fructose/sorbose porter component IID... 0.05 OrthoFinder
AEA94999 OG1RF_12312 PTS family N-acetylgalactosamine (nac) porter component... 0.02 OrthoFinder
AEA95166 OG1RF_12479 PTS family porter component II [Ensembl]. PTS system... 0.07 OrthoFinder
AGT26089 N559_4484 PTS family mannose/fructose/sorbose porter component IID... 0.17 OrthoFinder
AGT26482 N559_4898 PTS enzyme IID, mannose-specific [Ensembl]. PTS system... 0.04 OrthoFinder
AKI49995 L2625_02148 PTS system, mannose/fructose/sorbose family, IID... 0.09 OrthoFinder
CCG26942 No alias PTS system, mannose-specific IID component [Ensembl].... 0.06 OrthoFinder
CCG27555 No alias PTS system, N-acetylgalactosamine-specific IID component... 0.03 OrthoFinder
CCL17253 BN171_1410015 PTS system, mannose/fructose/sorbose IID component... 0.08 OrthoFinder
CCL19758 BN171_3460002 PTS system, mannose/fructose/sorbose IID component... 0.04 OrthoFinder
CCL20259 BN171_390013 PTS system, mannose/fructose/sorbose IID component... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0047465 N-acylglucosamine-6-phosphate 2-epimerase activity IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004704 PTS_IID_man 16 278
No external refs found!