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  5. CPC31435

CPC31435 (arlR, ERS093114_00002)


Aliases : arlR, ERS093114_00002

Description : Putative response regulator ArlR [Ensembl]. Transcriptional regulatory protein, Response regulator receiver domain [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC31435
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AAC74680 rstA, b1608 response regulator of RstAB two-component system... 0.05 OrthoFinder
AAC75035 hprR, b1969 response regulator family protein [Ensembl].... 0.05 OrthoFinder
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.1 OrthoFinder
AAC76894 cpxR, b3912 response regulator in two-component regulatory system... 0.02 OrthoFinder
AAC77074 basR, b4113 response regulator in two-component regulatory system... 0.05 OrthoFinder
AAK98880 spr0076, rr08 Response regulator [Ensembl]. Transcriptional regulatory... 0.04 OrthoFinder
AAK99382 spr0578, rr09 Response regulator [Ensembl]. Helix-turn-helix domain,... 0.03 OrthoFinder
AAK99910 spr1107, rr02 Response regulator [Ensembl]. Transcriptional regulatory... 0.03 OrthoFinder
AAL20028 STM1096, copR Copper resistance transcriptional regulatory protein... 0.05 OrthoFinder
AAL22051 STM3177, ygiX putative transcriptional regulator [Ensembl]. Response... 0.06 OrthoFinder
AAL22364 STM3502, ompR response regulator in two-component regulatory system... 0.04 OrthoFinder
AAL23116 STM4292, basR response regulator in two-component regulatory system... 0.04 OrthoFinder
AEA93716 OG1RF_11029 response regulator [Ensembl]. Response regulator... 0.03 OrthoFinder
AEA95222 OG1RF_12535 response regulator [Ensembl]. Response regulator... 0.02 OrthoFinder
AGT22192 N559_0379 osmolarity response regulator [Ensembl]. Response... 0.02 OrthoFinder
AGT25042 N559_3389 putative positive response regulator [Ensembl]. Response... 0.02 OrthoFinder
AGT25177 N559_3529, BasR DNA-binding transcriptional regulator BasR [Ensembl].... 0.04 OrthoFinder
AGT25698 N559_4072, PhoB transcriptional regulator PhoB [Ensembl]. Response... 0.02 OrthoFinder
AGT26636 N559_5059, CpxR DNA-binding transcriptional regulator CpxR [Ensembl].... 0.02 OrthoFinder
AGT26862 N559_5288 Transcriptional regulatory protein pcoR [Ensembl].... 0.05 OrthoFinder
AGT26875 N559_5301, CusR DNA-binding transcriptional activator CusR [Ensembl].... 0.05 OrthoFinder
CCG26924 No alias Two-component system response regulator [Ensembl].... 0.06 OrthoFinder
CCL16989 BN171_1060003 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL18215 BN171_2170002 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL19032 BN171_2820002 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL19099 BN171_2870029 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL19656 BN171_3350005 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL20055 BN171_3670038 Two-component response regulator, CheY family [Ensembl].... 0.03 OrthoFinder
CCL20251 BN171_390005 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCP43225 regX3, Rv0491 Two component sensory transduction protein RegX3... 0.02 OrthoFinder
CCP43777 kdpE, Rv1027c Probable transcriptional regulatory protein KdpE... 0.02 OrthoFinder
CCP43784 trcR, Rv1033c Two component transcriptional regulator TrcR [Ensembl].... 0.04 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.08 OrthoFinder
CRN72185 baeR_1 Transcriptional regulatory protein BaeR [Ensembl].... 0.03 OrthoFinder
CRO24960 ompR_1 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.04 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.11 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.04 OrthoFinder
CRP18948 ompR_3 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.06 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.05 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.08 OrthoFinder
EDJ90310 CGSHi22421_02241 transcriptional regulatory protein [Ensembl].... 0.03 OrthoFinder
EDJ90537 CGSHi22421_03168 phosphate regulon transcriptional regulatory protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004040 amidase activity IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
InterPro domains Description Start Stop
IPR001867 OmpR/PhoB-type_DNA-bd 143 217
IPR001789 Sig_transdc_resp-reg_receiver 4 113
No external refs found!