1. Home
  2. Species
  3. Staphylococcus aureus
  4. Sequence
  5. CPC32208

CPC32208 (nikB, ERS093114_00035)


Aliases : nikB, ERS093114_00035

Description : nickel transport system permease protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC32208
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC74326 oppB, b1244 oligopeptide ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.02 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAL00509 spr1706, amiC ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AAL22490 STM3629, dppB dipeptide transport protein 1 [Ensembl].... 0.03 OrthoFinder
AGT22074 N559_0252, DppB dipeptide transporter permease DppB [Ensembl].... 0.03 OrthoFinder
AGT23464 N559_1722, DppB putative dipeptide ABC transporter, permease protein... 0.03 OrthoFinder
AGT23803 N559_2085 oligopeptide transporter permease [Ensembl].... 0.03 OrthoFinder
AGT24128 N559_2435 peptide ABC transporter membrane protein [Ensembl].... 0.04 OrthoFinder
AGT25118 N559_3467 peptide ABC transporter membrane protein [Ensembl].... 0.03 OrthoFinder
AGT25384 N559_3746 putative ABC transport system permease component... 0.04 OrthoFinder
CBI65786 oppB, HPB8_229 peptide/nickel transport system permease protein... 0.02 OrthoFinder
CBI66820 dppB, HPB8_1263 dipeptide ABC transporter, permease protein (DppB)... 0.02 OrthoFinder
CCG26341 OppB Oligopeptide transport system permease protein OppB (TC... 0.03 OrthoFinder
CCL19135 appB, BN171_2880002 ABC-type transport system, oligopeptide-family permease... 0.04 OrthoFinder
CCP44039 oppB, Rv1283c Probable oligopeptide-transport integral membrane... 0.02 OrthoFinder
CPC43926 oppB_2, ERS093114_00443 peptide ABC transporter permease [Ensembl].... 0.03 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.03 OrthoFinder
EDJ90883 CGSHi22421_03503 peptide ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
EDJ91926 CGSHi22421_09223 oligopeptide permease ABC transporter membrane component... 0.03 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA58586 VCV51_031121 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA60922 VCV51_031896 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015093 ferrous iron transmembrane transporter activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 119 305
No external refs found!