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CPC32416 (trpA, ERS093114_00043)


Aliases : trpA, ERS093114_00043

Description : tryptophan synthase subunit alpha [Ensembl]. Tryptophan synthase alpha chain [Interproscan].


Gene families : OG_02_0000714 (OrthoFinder) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC32416
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC74342 trpA, b1260 tryptophan synthase, alpha subunit [Ensembl]. Tryptophan... 0.1 OrthoFinder
AAL00434 spr1631, trpA Tryptophan synthase alpha chain [Ensembl]. Tryptophan... 0.08 OrthoFinder
AAL20645 STM1727, trpA tryptophan synthase, alpha protein [Ensembl]. Tryptophan... 0.14 OrthoFinder
AGT24683 N559_3020 tryptophan synthase subunit alpha [Ensembl]. 0.2 OrthoFinder
AHY39605 trpA, CJ8421_01750 tryptophan synthase subunit alpha [Ensembl]. Tryptophan... 0.13 OrthoFinder
AKI49624 trpA, L2625_01734 tryptophan synthase, alpha subunit [Ensembl]. Tryptophan... 0.13 OrthoFinder
CCP44377 trpA, Rv1613 Probable tryptophan synthase, alpha subunit TrpA... 0.03 OrthoFinder
CRP69127 trpA Tryptophan synthase alpha chain [Ensembl]. Tryptophan... 0.03 OrthoFinder
EDJ91075 CGSHi22421_10052 tryptophan synthase subunit alpha [Ensembl]. Tryptophan... 0.16 OrthoFinder
KNA53894 VCV51_030823 tryptophan synthase subunit alpha [Ensembl]. Tryptophan... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEA Interproscan
BP GO:0006568 tryptophan metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002028 Trp_synthase_suA 3 231
No external refs found!