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CPC33033 (sbcD, ERS093114_00071)


Aliases : sbcD, ERS093114_00071

Description : SbcD protein [Ensembl]. Calcineurin-like phosphoesterase, Type 5 capsule protein repressor C-terminal domain [Interproscan].


Gene families : OG_02_0001176 (OrthoFinder) Phylogenetic Tree(s): OG0001176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC33033
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC73501 sbcD, b0398 exonuclease, dsDNA, ATP-dependent [Ensembl].... 0.2 OrthoFinder
AAL19350 STM0396, sbcD ATP-dependent dsDNA exonuclease [Ensembl].... 0.02 OrthoFinder
AEA94746 sbcD, OG1RF_12059 exonuclease SbcD [Ensembl]. Calcineurin-like... 0.01 OrthoFinder
AGT25699 N559_4073, SbcD exonuclease subunit SbcD [Ensembl]. Type 5 capsule... 0.01 OrthoFinder
CCL17184 sbcD, BN171_1360006 Nuclease SbcCD subunit D [Ensembl]. Calcineurin-like... 0.02 OrthoFinder
KNA51560 VCV51_033603 nuclease SbcCD [Ensembl]. Calcineurin-like... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR026843 SbcD_C 261 347
IPR004843 Calcineurin-like_PHP_ApaH 1 214
No external refs found!