CPC35808 (rplS, ERS093114_00183)


Aliases : rplS, ERS093114_00183

Description : 50S ribosomal protein L19 [Ensembl]. Ribosomal protein L19 [Interproscan].


Gene families : OG_02_0000375 (OrthoFinder) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC35808
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC75655 rplS, b2606 50S ribosomal subunit protein L19 [Ensembl]. Ribosomal... 0.09 OrthoFinder
AAK99974 spr1171, rplS 50S Ribosomal protein L19 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
AAL21562 STM2673, rplS 50S ribosomal subunit protein L19 [Ensembl]. Ribosomal... 0.11 OrthoFinder
ADK87174 rplS, MPNE_0768 ribosomal protein L19 [Ensembl]. Ribosomal protein L19... 0.04 OrthoFinder
AEA94251 rplS, OG1RF_11564 50S ribosomal protein L19 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
AHY39943 rplS, CJ8421_03520 50S ribosomal protein L19 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AKI49782 rplS, L2625_01929 ribosomal protein L19 [Ensembl]. Ribosomal protein L19... 0.02 OrthoFinder
CCG27123 No alias LSU ribosomal protein L19p [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
CCL17411 rplS, BN171_1490005 50S ribosomal protein L19 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CCP45706 rplS, Rv2904c 50S ribosomal protein L19 RplS [Ensembl]. Ribosomal... 0.05 OrthoFinder
CRO16764 rplS 50S ribosomal protein L19 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
EDJ90613 CGSHi22421_01372 anaerobic C4-dicarboxylate transporter [Ensembl].... 0.04 OrthoFinder
KNA51825 VCV51_033512 ribosomal protein L19 [Ensembl]. Ribosomal protein L19... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 6 114
No external refs found!