Coexpression cluster: Cluster_24 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005840 ribosome 52.17% (24/46) 5.07 0.0 0.0
GO:0006412 translation 52.17% (24/46) 5.07 0.0 0.0
GO:0003735 structural constituent of ribosome 52.17% (24/46) 5.03 0.0 0.0
GO:0005198 structural molecule activity 52.17% (24/46) 5.03 0.0 0.0
GO:0043226 organelle 52.17% (24/46) 4.97 0.0 0.0
GO:0043229 intracellular organelle 52.17% (24/46) 4.97 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 52.17% (24/46) 4.97 0.0 0.0
GO:0043228 non-membrane-bounded organelle 52.17% (24/46) 4.97 0.0 0.0
GO:0043043 peptide biosynthetic process 52.17% (24/46) 4.93 0.0 0.0
GO:0006518 peptide metabolic process 52.17% (24/46) 4.93 0.0 0.0
GO:0009059 macromolecule biosynthetic process 58.7% (27/46) 4.43 0.0 0.0
GO:0043604 amide biosynthetic process 52.17% (24/46) 4.84 0.0 0.0
GO:0043603 cellular amide metabolic process 52.17% (24/46) 4.78 0.0 0.0
GO:0044267 cellular protein metabolic process 52.17% (24/46) 4.78 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 56.52% (26/46) 4.45 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 56.52% (26/46) 3.96 0.0 0.0
GO:0019538 protein metabolic process 52.17% (24/46) 4.2 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 56.52% (26/46) 3.53 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 52.17% (24/46) 3.69 0.0 0.0
GO:0044249 cellular biosynthetic process 58.7% (27/46) 3.29 0.0 0.0
GO:1901576 organic substance biosynthetic process 58.7% (27/46) 3.26 0.0 0.0
GO:0043170 macromolecule metabolic process 60.87% (28/46) 2.98 0.0 0.0
GO:0009058 biosynthetic process 58.7% (27/46) 3.06 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 58.7% (27/46) 2.82 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 52.17% (24/46) 2.79 0.0 0.0
GO:0044237 cellular metabolic process 63.04% (29/46) 2.32 0.0 0.0
GO:0006807 nitrogen compound metabolic process 58.7% (27/46) 2.37 0.0 0.0
GO:0044238 primary metabolic process 58.7% (27/46) 2.3 0.0 0.0
GO:0071704 organic substance metabolic process 60.87% (28/46) 2.08 0.0 0.0
GO:0008152 metabolic process 63.04% (29/46) 1.96 0.0 0.0
GO:0110165 cellular anatomical entity 54.35% (25/46) 2.17 0.0 0.0
GO:0005575 cellular_component 54.35% (25/46) 2.1 0.0 0.0
GO:0009987 cellular process 63.04% (29/46) 1.68 0.0 0.0
GO:0008150 biological_process 65.22% (30/46) 1.22 0.0 1e-06
GO:0003674 molecular_function 69.57% (32/46) 0.85 1.6e-05 6.5e-05
GO:0003723 RNA binding 13.04% (6/46) 3.07 5.7e-05 0.000221
GO:0045182 translation regulator activity 4.35% (2/46) 4.84 0.001746 0.006223
GO:0090079 translation regulator activity, nucleic acid binding 4.35% (2/46) 4.84 0.001746 0.006223
GO:0008135 translation factor activity, RNA binding 4.35% (2/46) 4.84 0.001746 0.006223
GO:0019843 rRNA binding 4.35% (2/46) 4.52 0.002878 0.009999
GO:0032774 RNA biosynthetic process 4.35% (2/46) 4.26 0.004268 0.014471
GO:0017111 nucleoside-triphosphatase activity 4.35% (2/46) 4.03 0.00591 0.019103
GO:0003924 GTPase activity 4.35% (2/46) 4.03 0.00591 0.019103
GO:0003676 nucleic acid binding 17.39% (8/46) 1.44 0.007693 0.024302
GO:0016462 pyrophosphatase activity 4.35% (2/46) 3.52 0.012248 0.037833
GO:0016817 hydrolase activity, acting on acid anhydrides 4.35% (2/46) 3.38 0.014805 0.043785
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.35% (2/46) 3.38 0.014805 0.043785
GO:0004017 adenylate kinase activity 2.17% (1/46) 5.84 0.017438 0.046612
GO:0008097 5S rRNA binding 2.17% (1/46) 5.84 0.017438 0.046612
GO:0003743 translation initiation factor activity 2.17% (1/46) 5.84 0.017438 0.046612
GO:0006413 translational initiation 2.17% (1/46) 5.84 0.017438 0.046612
GO:0016987 sigma factor activity 2.17% (1/46) 5.84 0.017438 0.046612
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_2 0.034 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.177 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.156 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_7 0.087 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_12 0.044 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.083 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.254 OrthoFinder Compare
Escherichia coli HCCA Cluster_38 0.031 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_7 0.038 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_17 0.257 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_6 0.031 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.164 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_13 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.188 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.048 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_38 0.055 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.193 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.048 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_3 0.06 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_5 0.16 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_25 0.111 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_6 0.109 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.031 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.124 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.06 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.435 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_7 0.198 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.087 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.096 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_7 0.031 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.037 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.435 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.031 OrthoFinder Compare
Sequences (46) (download table)

InterPro Domains

GO Terms

Family Terms