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  5. CPC38497

CPC38497 (sdhB_1, ERS093114_00276)


Aliases : sdhB_1, ERS093114_00276

Description : succinate dehydrogenase iron-sulfur subunit [Ensembl]. 4Fe-4S dicluster domain, 2Fe-2S iron-sulfur cluster binding domain [Interproscan].


Gene families : OG_02_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC38497
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC73818 sdhB, b0724 succinate dehydrogenase, FeS subunit [Ensembl]. 4Fe-4S... 0.1 OrthoFinder
AAL19679 STM0735, sdhB succinate dehydrogenase, Fe-S protein [Ensembl]. 4Fe-4S... 0.14 OrthoFinder
AGT25240 N559_3593 succinate dehydrogenase iron-sulfur subunit [Ensembl].... 0.08 OrthoFinder
AHY39666 frdB, CJ8421_02055 fumarate reductase iron-sulfur subunit [Ensembl]. 4Fe-4S... 0.05 OrthoFinder
AHY39694 CJ8421_02195 succinate dehydrogenase, iron-sulfur protein subunit... 0.03 OrthoFinder
AKP16041 sdhB, WX61_02014 Succinate dehydrogenase iron-sulfur subunit [Ensembl].... 0.03 OrthoFinder
CBI66933 frdB, HPB8_1376 fumarate reductase iron-sulfur protein [Ensembl]. 4Fe-4S... 0.03 OrthoFinder
CCP42976 Rv0247c Probable succinate dehydrogenase [iron-sulfur subunit]... 0.02 OrthoFinder
CCP46139 sdhB, Rv3319 Probable succinate dehydrogenase (iron-sulphur protein... 0.01 OrthoFinder
CRP29482 sdhB Succinate dehydrogenase iron-sulfur subunit [Ensembl].... 0.06 OrthoFinder
KNA59600 VCV51_031402 succinate dehydrogenase and fumarate reductase... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004517 nitric-oxide synthase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0006809 nitric oxide biosynthetic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0043934 sporulation IEP Enrichment
BP GO:0046209 nitric oxide metabolic process IEP Enrichment
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
BP GO:2001057 reactive nitrogen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 167 242
IPR025192 Succ_DH/fum_Rdtase_N 25 133
No external refs found!