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  5. CPC39148

CPC39148 (rpmF, ERS093114_00298)


Aliases : rpmF, ERS093114_00298

Description : 50S ribosomalprotein L32p [Ensembl]. Ribosomal L32p protein family [Interproscan].


Gene families : OG_02_0000435 (OrthoFinder) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC39148
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAC74173 rpmF, b1089 50S ribosomal subunit protein L32 [Ensembl]. Ribosomal... 0.12 OrthoFinder
AAL00745 spr1943, rpmF 50S Ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.04 OrthoFinder
AAL20120 STM1191, rpmF 50S ribosomal subunit protein L32 [Ensembl]. Ribosomal... 0.04 OrthoFinder
AEA93468 rpmF, OG1RF_10781 50S ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.06 OrthoFinder
AHY39584 rpmF, CJ8421_01635 50S ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.03 OrthoFinder
AKP15316 rpmF, WX61_01267 50S ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.08 OrthoFinder
CCL17328 rpmF, BN171_1440012 50S ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.04 OrthoFinder
CRO47021 rpmF 50S ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.1 OrthoFinder
KNA59659 VCV51_032545 ribosomal protein L32 [Ensembl]. Ribosomal L32p protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002677 Ribosomal_L32p 2 56
No external refs found!