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CPC43717 (oppD_1, ERS093114_00437)


Aliases : oppD_1, ERS093114_00437

Description : Oligopeptide transport ATP-binding protein oppD [Ensembl]. ABC transporter, Oligopeptide/dipeptide transporter [Interproscan].


Gene families : OG_02_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC43717
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC74329 oppF, b1247 oligopeptide ABC transporter ATPase [Ensembl]. ABC... 0.02 OrthoFinder
AAC74372 sapF, b1290 antimicrobial peptide ABC transporter ATPase [Ensembl].... 0.03 OrthoFinder
AAC74373 sapD, b1291 antimicrobial peptide ABC transporter ATPase [Ensembl].... 0.04 OrthoFinder
AAC74557 ddpD, b1484 D,D-dipeptide ABC transporter ATPase [Ensembl]. ABC... 0.02 OrthoFinder
AAC76565 dppF, b3540 dipeptide/heme ABC transporter ATPas [Ensembl]. ABC... 0.03 OrthoFinder
AAC76566 dppD, b3541 dipeptide/heme ABC transporter ATPas [Ensembl]. ABC... 0.03 OrthoFinder
AAT48129 oppD, b1246 oligopeptide ABC transporter ATPase [Ensembl]. ABC... 0.02 OrthoFinder
AEA95056 opp2F, OG1RF_12369 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AGT22076 N559_0254 dipeptide transporter ATP-binding subunit [Ensembl]. 0.02 OrthoFinder
AGT23466 N559_1724 putative dipeptide ABC transport system ATP-binding... 0.03 OrthoFinder
CBI66817 dppF, HPB8_1260 dipeptide ABC transporter, ATP-binding protein (DppF)... 0.02 OrthoFinder
CBI66818 dppD, HPB8_1261 dipeptide ABC transporter, ATP-binding protein (DppD)... 0.02 OrthoFinder
CRP12213 oppD Stage 0 sporulation protein KD [Ensembl]. ABC... 0.03 OrthoFinder
CRP12239 gsiA_4 Glutathione import ATP-binding protein GsiA [Ensembl].... 0.03 OrthoFinder
KNA51869 VCV51_030399 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder
KNA51870 VCV51_030400 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0015833 peptide transport IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001906 cell killing IEP Enrichment
BP GO:0002376 immune system process IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
BP GO:0009617 response to bacterium IEP Enrichment
BP GO:0019835 cytolysis IEP Enrichment
BP GO:0031640 killing of cells of other organism IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
BP GO:0042742 defense response to bacterium IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051715 cytolysis in other organism IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
InterPro domains Description Start Stop
IPR013563 Oligopep_ABC_C 236 301
IPR003439 ABC_transporter-like_ATP-bd 26 184
No external refs found!