CPC52820 (msbA_1, ERS093114_00710)


Aliases : msbA_1, ERS093114_00710

Description : Lipid A export ATP-binding/permease protein MsbA [Ensembl]. ABC transporter transmembrane region [Interproscan].


Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC52820
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAK98847 spr0043, comA Transport ATP-binding protein ComA [Ensembl]. Peptidase... 0.03 OrthoFinder
AAL00689 spr1887, ABC-NP ABC transporter ATP-binding/membrane spanning... 0.03 OrthoFinder
AEA93997 OG1RF_11310 multidrug ABC superfamily ATP binding cassette... 0.02 OrthoFinder
AEA94659 OG1RF_11972 multidrug resistance ABC superfamily ATP binding... 0.03 OrthoFinder
AKP14872 WX61_00805 Putative multidrug export ATP-binding/permease protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0000921 septin ring assembly IEP Enrichment
BP GO:0001906 cell killing IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005940 septin ring IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0019835 cytolysis IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0031106 septin ring organization IEP Enrichment
BP GO:0031640 killing of cells of other organism IEP Enrichment
CC GO:0032156 septin cytoskeleton IEP Enrichment
BP GO:0032185 septin cytoskeleton organization IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0051715 cytolysis in other organism IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 351 501
IPR011527 ABC1_TM_dom 24 289
No external refs found!