1. Home
  2. Species
  3. Staphylococcus aureus
  4. Sequence
  5. CPC57393

CPC57393 (rplA, ERS093114_00841)


Aliases : rplA, ERS093114_00841

Description : 50S ribosomal protein L1 [Ensembl]. Ribosomal protein L1p/L10e family [Interproscan].


Gene families : OG_02_0000440 (OrthoFinder) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC57393
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC76958 rplA, b3984 50S ribosomal subunit protein L1 [Ensembl]. Ribosomal... 0.36 OrthoFinder
AAK99360 spr0556, rplA 50S Ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
AAL22978 STM4150, rplA 50S ribosomal subunit protein L1 [Ensembl]. Ribosomal... 0.35 OrthoFinder
ADK86720 rplA, MPNE_0252 ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
AEA94769 rplA, OG1RF_12082 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.3 OrthoFinder
AGT26520 N559_4936 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
AHY39728 rplA, CJ8421_02375 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
AKI48216 rplA, L2625_00266 ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
AKP15108 rplA, WX61_01054 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
CCG26742 L10Ae LSU ribosomal protein L1p (L10Ae) [Ensembl]. Ribosomal... 0.17 OrthoFinder
CCL20640 rplA, BN171_80005 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
CCP43384 rplA, Rv0641 50S ribosomal protein L1 RplA [Ensembl]. Ribosomal... 0.03 OrthoFinder
CRO73477 rplA 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
EDJ91478 rplK, CGSHi22421_06902 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
KNA49131 VCV51_033811 ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 32 220
No external refs found!