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  5. CPC70217

CPC70217 (vicR, ERS093114_01104)


Aliases : vicR, ERS093114_01104

Description : Two-component response regulator [Ensembl]. Transcriptional regulatory protein, Response regulator receiver domain [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC70217
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AAC74680 rstA, b1608 response regulator of RstAB two-component system... 0.07 OrthoFinder
AAC75035 hprR, b1969 response regulator family protein [Ensembl].... 0.07 OrthoFinder
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.2 OrthoFinder
AAC76894 cpxR, b3912 response regulator in two-component regulatory system... 0.02 OrthoFinder
AAC77074 basR, b4113 response regulator in two-component regulatory system... 0.07 OrthoFinder
AAK98880 spr0076, rr08 Response regulator [Ensembl]. Transcriptional regulatory... 0.02 OrthoFinder
AAK99332 spr0528, vncR VncR, response regulator [Ensembl]. Transcriptional... 0.02 OrthoFinder
AAK99382 spr0578, rr09 Response regulator [Ensembl]. Helix-turn-helix domain,... 0.01 OrthoFinder
AAK99511 spr0707, ciaR Response regulator, transcriptional regulatory protein... 0.02 OrthoFinder
AAK99910 spr1107, rr02 Response regulator [Ensembl]. Transcriptional regulatory... 0.01 OrthoFinder
AAL00695 spr1893, phoP Response regulator [Ensembl]. Transcriptional regulatory... 0.01 OrthoFinder
AAL00800 spr1998, rr06 Response regulator [Ensembl]. Transcriptional regulatory... 0.01 OrthoFinder
AAL20028 STM1096, copR Copper resistance transcriptional regulatory protein... 0.06 OrthoFinder
AAL21035 STM2131, baeR response regulator in two-component regulatory system... 0.02 OrthoFinder
AAL22051 STM3177, ygiX putative transcriptional regulator [Ensembl]. Response... 0.08 OrthoFinder
AAL22364 STM3502, ompR response regulator in two-component regulatory system... 0.05 OrthoFinder
AAL22899 STM4059, cpxR response reguator in two-component regulatory system... 0.01 OrthoFinder
AAL23116 STM4292, basR response regulator in two-component regulatory system... 0.05 OrthoFinder
AEA92946 OG1RF_10259 response regulator [Ensembl]. Response regulator... 0.02 OrthoFinder
AEA93716 OG1RF_11029 response regulator [Ensembl]. Response regulator... 0.02 OrthoFinder
AEA94101 phoP, OG1RF_11414 response regulator [Ensembl]. Response regulator... 0.01 OrthoFinder
AEA94850 vanR, OG1RF_12163 response regulator [Ensembl]. Response regulator... 0.01 OrthoFinder
AEA95222 OG1RF_12535 response regulator [Ensembl]. Response regulator... 0.01 OrthoFinder
AEA95261 OG1RF_12574 response regulator [Ensembl]. Response regulator... 0.02 OrthoFinder
AGT22192 N559_0379 osmolarity response regulator [Ensembl]. Response... 0.02 OrthoFinder
AGT22533 N559_0740, QseB DNA-binding transcriptional regulator QseB [Ensembl].... 0.01 OrthoFinder
AGT25042 N559_3389 putative positive response regulator [Ensembl]. Response... 0.02 OrthoFinder
AGT25177 N559_3529, BasR DNA-binding transcriptional regulator BasR [Ensembl].... 0.05 OrthoFinder
AGT25698 N559_4072, PhoB transcriptional regulator PhoB [Ensembl]. Response... 0.03 OrthoFinder
AGT26636 N559_5059, CpxR DNA-binding transcriptional regulator CpxR [Ensembl].... 0.02 OrthoFinder
AGT26862 N559_5288 Transcriptional regulatory protein pcoR [Ensembl].... 0.03 OrthoFinder
AGT26875 N559_5301, CusR DNA-binding transcriptional activator CusR [Ensembl].... 0.03 OrthoFinder
AHY40427 CJ8421_06100 two-component regulator [Ensembl]. Transcriptional... 0.01 OrthoFinder
AHY40431 CJ8421_06120 DNA-binding response regulator [Ensembl].... 0.01 OrthoFinder
AKI49374 lisR, L2625_01474 two component response regulator [Ensembl].... 0.01 OrthoFinder
AKI49504 L2625_01607 DNA-binding response regulator [Ensembl]. Signal... 0.03 OrthoFinder
AKI50514 L2625_02705 DNA-binding response regulator [Ensembl]. Signal... 0.01 OrthoFinder
CBI67093 HPB8_1536 two-component system, OmpR family, response regulator... 0.01 OrthoFinder
CCG26613 CiaR Two component system response regulator CiaR [Ensembl].... 0.03 OrthoFinder
CCG26924 No alias Two-component system response regulator [Ensembl].... 0.03 OrthoFinder
CCG27642 No alias Two-component response regulator SA14-24 [Ensembl].... 0.02 OrthoFinder
CCL16989 BN171_1060003 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL17156 BN171_1330017 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL17650 BN171_1640040 Two-component response regulator [Ensembl]. Response... 0.01 OrthoFinder
CCL17733 BN171_1740008 Two-component response regulator [Ensembl]. Response... 0.01 OrthoFinder
CCL17829 vanR, BN171_1830003 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL17877 BN171_1920004 Two-component response regulator [Ensembl]. Response... 0.01 OrthoFinder
CCL17895 BN171_1930007 Two-component response regulator [Ensembl]. Response... 0.01 OrthoFinder
CCL18024 BN171_2030010 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL18125 kdpE, BN171_2100009 Two-component response regulator KdpE [Ensembl].... 0.01 OrthoFinder
CCL18215 BN171_2170002 Two-component response regulator [Ensembl]. Response... 0.01 OrthoFinder
CCL18472 BN171_2380003 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL18738 BN171_260007 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL18961 BN171_2770012 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL19099 BN171_2870029 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL19656 BN171_3350005 Two-component response regulator [Ensembl]. Response... 0.05 OrthoFinder
CCL19749 BN171_3450003 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL19825 BN171_3520011 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL20055 BN171_3670038 Two-component response regulator, CheY family [Ensembl].... 0.04 OrthoFinder
CCL20068 BN171_3690012 Two-component response regulator, CheY family [Ensembl].... 0.01 OrthoFinder
CCL20132 BN171_370006 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL20251 BN171_390005 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL20618 BN171_750002 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL20655 BN171_830005 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCP43225 regX3, Rv0491 Two component sensory transduction protein RegX3... 0.03 OrthoFinder
CCP43651 prrA, Rv0903c Two component response transcriptional regulatory... 0.01 OrthoFinder
CCP43777 kdpE, Rv1027c Probable transcriptional regulatory protein KdpE... 0.02 OrthoFinder
CCP43784 trcR, Rv1033c Two component transcriptional regulator TrcR [Ensembl].... 0.05 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.08 OrthoFinder
CPC50543 saeR, ERS093114_00646 Response regulator SaeR [Ensembl]. Transcriptional... 0.03 OrthoFinder
CPC86428 phoP, ERS093114_01516 Alkaline phosphatase synthesis transcriptional... 0.03 OrthoFinder
CRN72185 baeR_1 Transcriptional regulatory protein BaeR [Ensembl].... 0.04 OrthoFinder
CRN77914 cusR Transcriptional regulatory protein CusR [Ensembl].... 0.01 OrthoFinder
CRO19997 qseB_2 Transcriptional regulatory protein QseB [Ensembl].... 0.02 OrthoFinder
CRO24960 ompR_1 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.06 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.25 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.06 OrthoFinder
CRP18948 ompR_3 Transcriptional regulatory protein OmpR [Ensembl].... 0.04 OrthoFinder
CRP32671 czcR_3 Transcriptional activator protein CzcR [Ensembl].... 0.02 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.08 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.06 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.12 OrthoFinder
EDJ90310 CGSHi22421_02241 transcriptional regulatory protein [Ensembl].... 0.03 OrthoFinder
EDJ90537 CGSHi22421_03168 phosphate regulon transcriptional regulatory protein... 0.01 OrthoFinder
KNA52268 VCV51_033433 response regulator receiver domain-containing protein... 0.01 OrthoFinder
KNA54887 VCV51_031804 response regulator receiver domain-containing protein... 0.02 OrthoFinder
KNA55120 VCV51_031823 response regulator receiver domain-containing protein... 0.01 OrthoFinder
KNA55649 VCV51_033016 response regulator receiver domain-containing protein... 0.01 OrthoFinder
KNA58243 VCV51_032751 response regulator receiver domain-containing protein... 0.01 OrthoFinder
KNA60550 VCV51_032221 response regulator receiver domain-containing protein... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 5 114
IPR001867 OmpR/PhoB-type_DNA-bd 153 229
No external refs found!