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  5. CPC89687

CPC89687 (rpsR, ERS093114_01560)


Aliases : rpsR, ERS093114_01560

Description : 30S ribosomalprotein S18p [Ensembl]. Ribosomal protein S18 [Interproscan].


Gene families : OG_02_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC89687
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC77159 rpsR, b4202 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.38 OrthoFinder
AAL00198 spr1394, rpsR 30S Ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AAL23213 STM4393, rpsR 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.35 OrthoFinder
ADK87142 rpsR, MPNE_0262 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.13 OrthoFinder
AEA92696 rpsR, OG1RF_10009 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
AGT26291 N559_4699 30S ribosomal protein S18 [Ensembl]. 0.17 OrthoFinder
AHY40278 rpsR, CJ8421_05330 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AKI48022 rpsR, L2625_00047 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.34 OrthoFinder
AKP14205 rpsR, WX61_00116 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CBI65793 rpsR, HPB8_236 small subunit ribosomal protein S18 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCG26822 No alias SSU ribosomal protein S18p @ SSU ribosomal protein S18p,... 0.13 OrthoFinder
CCL20147 rpsR, BN171_3710001 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CCP42777 rpsR1, Rv0055 30S ribosomal protein S18-1 RpsR1 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CRO53994 rpsR 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
EDJ91446 rpsR, CGSHi22421_06742 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
KNA49061 VCV51_033836 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 23 73
No external refs found!