CPC91357 (rpiR, ERS093114_01611)

Aliases : rpiR, ERS093114_01611

Description : Sialic acid utilization regulator%2C RpiR family [Ensembl]. SIS domain, Helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CPC91357
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AGT26100	N559_4495	transcriptional regulator [Ensembl]. Helix-turn-helix...	0.01	OrthoFinder
AKI50732	L2625_02948	phosphosugar-binding transcriptional regulator, RpiR...	0.02	OrthoFinder
CCL18386	BN171_2280002	Transcriptional regulator, RpiR family [Ensembl]....	0.01	OrthoFinder
CCL18633	BN171_2480008	Transcriptional regulator, RpiR family [Ensembl]....	0.01	OrthoFinder
CCL19528	BN171_3210001	Transcriptional regulator, RpiR family [Ensembl]....	0.02	OrthoFinder
EDJ90289	CGSHi22421_09517	N-acetylmannosamine kinase [Ensembl]. SIS domain,...	0.02	OrthoFinder
KNA52478	VCV51_030140	transcriptional regulator [Ensembl]. SIS domain,...	0.02	OrthoFinder
KNA58972	VCV51_031233	transcriptional regulator [Ensembl]. SIS domain,...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097367	carbohydrate derivative binding	IEA	Interproscan
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	IEA	Interproscan
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008982	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001347	SIS_dom	115	239
IPR000281	HTH_RpiR	1	75

External Links

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CPC91357 (rpiR, ERS093114_01611)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation