CPC93182 (rbsD, ERS093114_01663)

Aliases : rbsD, ERS093114_01663

Description : Ribose ABC transport system%2C high affinity permease RbsD [Ensembl]. RbsD / FucU transport protein family [Interproscan].

Gene families : OG_02_0001866 (OrthoFinder) Phylogenetic Tree(s): OG0001866_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CPC93182
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AAC76771 rbsD, b3748 D-ribose pyranase [Ensembl]. RbsD / FucU transport... 0.05 OrthoFinder
AAL22739 STM3881, rbsD D-ribose high-affinity transport system [Ensembl]. RbsD... 0.05 OrthoFinder
AEA94930 rbsD, OG1RF_12243 ribose ABC superfamily ATP binding cassette transporter,... 0.03 OrthoFinder
AGT26699 N559_5125 D-ribose pyranase [Ensembl]. FucU transport protein... 0.03 OrthoFinder
KNA60664 VCV51_032103 RbsD/FucU transporter [Ensembl]. RbsD / FucU transport... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0005996 monosaccharide metabolic process IEA Interproscan
MF GO:0016853 isomerase activity IEA Interproscan
MF GO:0048029 monosaccharide binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
BP GO:0034219 carbohydrate transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR007721 RbsD_FucU 1 133
No external refs found!