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  5. CPD14543

CPD14543 (ecfA1_3, ERS093114_02151)


Aliases : ecfA1_3, ERS093114_02151

Description : ATPase component of general energizing module of ECF transporters [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD14543
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAK98953 spr0149, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AAL00827 spr2025, ABC-NBP ABC transporter ATP-binding protein-unknown substrate... 0.06 OrthoFinder
AAL00828 spr2026, stpA ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AEA92869 OG1RF_10182 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AEA92870 OG1RF_10183 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AHY39722 CJ8421_02345 Amino-acid ABC transporter ATP-binding protein... 0.03 OrthoFinder
AKI50535 cbiO-2, L2625_02745 cobalt ABC transporter, ATP-binding protein [Ensembl].... 0.04 OrthoFinder
AKI50536 cbiO-3, L2625_02746 cobalt ABC transporter, ATP-binding protein [Ensembl].... 0.03 OrthoFinder
CCG26400 No alias ATPase component of general energizing module of ECF... 0.03 OrthoFinder
CCG26401 No alias ATPase component of general energizing module of ECF... 0.03 OrthoFinder
CCL18560 BN171_2440001 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CCL20594 cbiO, BN171_70034 ABC-type transport system, cobalt-specific ATP-binding... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 24 174
No external refs found!