CPD14611 (truA, ERS093114_02153)


Aliases : truA, ERS093114_02153

Description : tRNA pseudouridine synthase A [Ensembl]. tRNA pseudouridine synthase [Interproscan].


Gene families : OG_02_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD14611
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAL00255 spr1451, truA tRNA pseudouridine synthase A [Ensembl]. tRNA... 0.05 OrthoFinder
AEA94984 truA2, OG1RF_12297 tRNA-pseudouridine synthase I [Ensembl]. tRNA... 0.03 OrthoFinder
AKI50533 truA, L2625_02743 tRNA pseudouridine synthase A [Ensembl]. Pseudouridine... 0.03 OrthoFinder
CCL20596 truA, BN171_70036 tRNA pseudouridine synthase A 1 [Ensembl]. tRNA... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0047355 CDP-glycerol glycerophosphotransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 142 241
IPR020097 PsdUridine_synth_TruA_a/b_dom 8 103
No external refs found!