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Aliases : BN171_3080015
Description : Putative signaling protein [Ensembl]. Diguanylate cyclase, EAL domain, Cache domain [Interproscan].
Gene families : OG_02_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCL19368 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC73920 | pdeI, b0833 | putative membrane-anchored cyclic-di-GMP... | 0.02 | OrthoFinder | |
| AGT23390 | N559_1644 | hypothetical protein [Ensembl]. EAL domain, CSS... | 0.03 | OrthoFinder | |
| AGT26421 | N559_4835 | hypothetical protein [Ensembl]. CSS motif domain... | 0.03 | OrthoFinder | |
| CCL17715 | BN171_1700002 | Putative diguanylate kinase signaling protein [Ensembl].... | 0.06 | OrthoFinder | |
| CRO28822 | gmr_4 | Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. EAL... | 0.03 | OrthoFinder | |
| CRO94804 | ycgF | Blue light-and temperature-regulated antirepressor YcgF... | 0.03 | OrthoFinder | |
| CRP17759 | cph2_7 | Bacteriophytochrome cph2 [Ensembl]. EAL domain, Response... | 0.03 | OrthoFinder | |
| CRP31108 | cph2_8 | Bacteriophytochrome cph2 [Ensembl]. GAF domain, EAL... | 0.05 | OrthoFinder | |
| KNA59789 | VCV51_032484 | EAL domain-containing protein [Ensembl]. GAF domain, EAL... | 0.03 | OrthoFinder | |
| KNA60571 | VCV51_032242 | EAL domain-containing protein [Ensembl]. EAL domain,... | 0.04 | OrthoFinder | |
| KNA60689 | VCV51_032128 | EAL domain-containing protein [Ensembl]. EAL domain... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006275 | regulation of DNA replication | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0007267 | cell-cell signaling | IEP | Enrichment |
| BP | GO:0009372 | quorum sensing | IEP | Enrichment |
| BP | GO:0009405 | obsolete pathogenesis | IEP | Enrichment |
| BP | GO:0009595 | detection of biotic stimulus | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0023052 | signaling | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0051606 | detection of stimulus | IEP | Enrichment |
| BP | GO:0051704 | multi-organism process | IEP | Enrichment |
| BP | GO:0060245 | detection of cell density | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| UniProtKB | U3WYS7 |