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  5. CPD17797

CPD17797 (opp-1B, ERS093114_02217)


Aliases : opp-1B, ERS093114_02217

Description : Oligopeptide transporter putative membrane permease domain protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD17797
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC73918 gsiC, b0831 glutathione ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC74326 oppB, b1244 oligopeptide ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.06 OrthoFinder
AAC76502 nikB, b3477 nickel ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAL00509 spr1706, amiC ABC transporter membrane-spanning permease-oligopeptide... 0.04 OrthoFinder
AAL19786 STM0850, yliC putative ABC transporter periplasmic binding protein... 0.03 OrthoFinder
AAL20610 STM1693, sapB ABC superfamily peptide transport protein [Ensembl].... 0.06 OrthoFinder
AAL20663 STM1745, oppB oligopeptide transport protein [Ensembl].... 0.02 OrthoFinder
AAL22490 STM3629, dppB dipeptide transport protein 1 [Ensembl].... 0.05 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AGT22074 N559_0252, DppB dipeptide transporter permease DppB [Ensembl].... 0.03 OrthoFinder
AGT22122 N559_0303, NikB nickel transporter permease NikB [Ensembl].... 0.02 OrthoFinder
AGT23464 N559_1722, DppB putative dipeptide ABC transporter, permease protein... 0.03 OrthoFinder
AGT24128 N559_2435 peptide ABC transporter membrane protein [Ensembl].... 0.03 OrthoFinder
AGT25118 N559_3467 peptide ABC transporter membrane protein [Ensembl].... 0.03 OrthoFinder
AGT26720 N559_5146, GsiC putative glutathione ABC transporter, permease protein... 0.02 OrthoFinder
AKI48108 L2625_00135 oligopeptide ABC transporter, permease protein... 0.04 OrthoFinder
CBI66820 dppB, HPB8_1263 dipeptide ABC transporter, permease protein (DppB)... 0.03 OrthoFinder
CCG26341 OppB Oligopeptide transport system permease protein OppB (TC... 0.03 OrthoFinder
CCP44039 oppB, Rv1283c Probable oligopeptide-transport integral membrane... 0.03 OrthoFinder
CPC43926 oppB_2, ERS093114_00443 peptide ABC transporter permease [Ensembl].... 0.04 OrthoFinder
CRO32970 gsiC Glutathione transport system permease protein GsiC... 0.02 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.06 OrthoFinder
EDJ90883 CGSHi22421_03503 peptide ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
EDJ91926 CGSHi22421_09223 oligopeptide permease ABC transporter membrane component... 0.03 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.06 OrthoFinder
KNA58586 VCV51_031121 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA60555 VCV51_032226 binding-protein-dependent transport system inner... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0019865 immunoglobulin binding IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 118 307
No external refs found!