CPD18723 (proV_2, ERS093114_02234)

Aliases : proV_2, ERS093114_02234

Description : glycine betaine transport ATP-binding protein [Ensembl]. CBS domain, ABC transporter [Interproscan].

Gene families : OG_02_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CPD18723
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AAC75190 yehX, b2129 putative ABC transporter ATPase [Ensembl]. ABC... 0.11 OrthoFinder
AAL00481 spr1678, proV ABC transporter ATP-binding protein-choline transporter... 0.01 OrthoFinder
AAL20410 STM1491 ABC-type proline/glycine betaine transport system... 0.02 OrthoFinder
AAL21067 STM2163, yehX putative ABC-type proline/glycine betaine transport... 0.04 OrthoFinder
AAL23054 STM4230, malK maltose transport protein [Ensembl]. ABC transporter,... 0.03 OrthoFinder
AEA93098 OG1RF_10411 ABC superfamily ATP binding cassette transporter, ABC... 0.02 OrthoFinder
AGT24061 N559_2362 ABC transporter, ATP-binding protein [Ensembl]. TOBE... 0.01 OrthoFinder
AKI49418 bilEA, L2625_01518 bile exclusion locus A [Ensembl]. ABC transporter-like... 0.01 OrthoFinder
CCL17065 opuCA, BN171_1180001 ABC-type transport system, glycine... 0.03 OrthoFinder
CCL19668 BN171_3370002 ABC-type transport system, glycine... 0.02 OrthoFinder
CRO00959 opuCA Glycine betaine/carnitine/choline transport ATP-binding... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 19 163
IPR000644 CBS_dom 253 300
IPR000644 CBS_dom 314 362
No external refs found!