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  5. CPD19364

CPD19364 (irtA, ERS093114_02254)


Aliases : irtA, ERS093114_02254

Description : ABC transporter ATPase/permease [Ensembl]. ABC transporter transmembrane region [Interproscan].


Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD19364
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAK98847 spr0043, comA Transport ATP-binding protein ComA [Ensembl]. Peptidase... 0.03 OrthoFinder
AAL00019 spr1215, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.03 OrthoFinder
CCL17658 BN171_1650001 ABC-type transport system, multidrug-family ATP-binding... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009292 genetic transfer IEP Enrichment
BP GO:0009294 DNA mediated transformation IEP Enrichment
MF GO:0015093 ferrous iron transmembrane transporter activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 356 503
IPR011527 ABC1_TM_dom 23 291
No external refs found!