CPD38229 (ERS093114_02716)

Aliases : ERS093114_02716

Description : truncated transposase for IS1272 [Ensembl]. Transposase DDE domain [Interproscan].

Gene families : OG_02_0000784 (OrthoFinder) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CPD38229
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method	Actions
AGT26800	N559_5226	putative ISKpn6-like transposase [Ensembl]. Transposase...	0.02	OrthoFinder
CPC70776	tnp, ERS093114_01119	IS1272 transposase [Ensembl]. Transposase DDE domain,...	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004803	transposase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006313	transposition, DNA-mediated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0032196	transposition	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001906	cell killing	IEP	Enrichment
BP	GO:0002376	immune system process	IEP	Enrichment
MF	GO:0003725	double-stranded RNA binding	IEP	Enrichment
CC	GO:0005576	extracellular region	IEP	Enrichment
BP	GO:0006952	defense response	IEP	Enrichment
BP	GO:0006955	immune response	IEP	Enrichment
BP	GO:0009617	response to bacterium	IEP	Enrichment
BP	GO:0015833	peptide transport	IEP	Enrichment
BP	GO:0019835	cytolysis	IEP	Enrichment
BP	GO:0031640	killing of cells of other organism	IEP	Enrichment
BP	GO:0042742	defense response to bacterium	IEP	Enrichment
BP	GO:0042886	amide transport	IEP	Enrichment
BP	GO:0043207	response to external biotic stimulus	IEP	Enrichment
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Enrichment
BP	GO:0051707	response to other organism	IEP	Enrichment
BP	GO:0051715	cytolysis in other organism	IEP	Enrichment
BP	GO:0098542	defense response to other organism	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002559	Transposase_11	9	81

External Links

No external refs found!