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  5. AAK99360

AAK99360 (spr0556, rplA)


Aliases : spr0556, rplA

Description : 50S Ribosomal protein L1 [Ensembl]. Ribosomal protein L1p/L10e family [Interproscan].


Gene families : OG_02_0000440 (OrthoFinder) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAK99360
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AAC76958 rplA, b3984 50S ribosomal subunit protein L1 [Ensembl]. Ribosomal... 0.16 OrthoFinder
AAL22978 STM4150, rplA 50S ribosomal subunit protein L1 [Ensembl]. Ribosomal... 0.16 OrthoFinder
ADK86720 rplA, MPNE_0252 ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AEA94769 rplA, OG1RF_12082 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
AGT26520 N559_4936 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AHY39728 rplA, CJ8421_02375 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder
AKI48216 rplA, L2625_00266 ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AKP15108 rplA, WX61_01054 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CCG26742 L10Ae LSU ribosomal protein L1p (L10Ae) [Ensembl]. Ribosomal... 0.11 OrthoFinder
CCL20640 rplA, BN171_80005 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
CPC57393 rplA, ERS093114_00841 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
CRO73477 rplA 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
EDJ91478 rplK, CGSHi22421_06902 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
KNA49131 VCV51_033811 ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0015658 branched-chain amino acid transmembrane transporter activity IEP Enrichment
BP GO:0015803 branched-chain amino acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 33 220
No external refs found!