AAK99682 (spr0878, rnr)

Aliases : spr0878, rnr

Description : Exoribonuclease R [Ensembl]. RNB domain, Cold shock domain, S1 RNA binding domain, Ribonuclease B OB domain [Interproscan].

Gene families : OG_02_0000589 (OrthoFinder) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAK99682
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AEA94681 rnr, OG1RF_11994 ribonuclease R [Ensembl]. RNB domain, Cold shock domain,... 0.03 OrthoFinder
AKI50377 vacB, L2625_02566 ribonuclease R [Ensembl]. Ribonuclease II/R, RNase... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004668 protein-arginine deiminase activity IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Enrichment
InterPro domains Description Start Stop
IPR001900 RNase_II/R 250 576
IPR040476 CSD2 154 228
IPR003029 S1_domain 624 702
IPR013223 RNase_B_OB_dom 70 127
No external refs found!