CCL19528 (BN171_3210001)

Aliases : BN171_3210001

Description : Transcriptional regulator, RpiR family [Ensembl]. Helix-turn-helix domain, SIS domain [Interproscan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL19528
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AAC74923 yebK, b1853 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
AEA93117 OG1RF_10430 RpiR family phosphosugar-binding transcriptional... 0.03 OrthoFinder
AKI50669 L2625_02883 HTH domain protein [Ensembl]. Sugar isomerase (SIS),... 0.04 OrthoFinder
CCG26277 No alias Sialic acid utilization regulator, RpiR family... 0.03 OrthoFinder
CPC91357 rpiR, ERS093114_01611 Sialic acid utilization regulator%2C RpiR family... 0.02 OrthoFinder
CPC96072 ybbH_1, ERS093114_01732 RpiR family transcriptional regulator [Ensembl]. SIS... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
MF GO:0097367 carbohydrate derivative binding IEA Interproscan
BP GO:1901135 carbohydrate derivative metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0015225 biotin transmembrane transporter activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0090482 vitamin transmembrane transporter activity IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001347 SIS_dom 108 210
IPR000281 HTH_RpiR 8 76
UniProtKB U3WZ95