CCL19531 (treR, BN171_3210004)

Aliases : treR, BN171_3210004

Description : Transcriptional regulator, GntR family [Ensembl]. UTRA domain, Bacterial regulatory proteins [Interproscan].

Gene families : OG_02_0000038 (OrthoFinder) Phylogenetic Tree(s): OG0000038_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCL19531
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AAC73824	mngR, b0730	transcriptional repressor for the mannosyl-D-glycerate...	0.03	OrthoFinder
AAL19384	STM0430, phnR	2-aminoethylphosphonate transport, repressor [Ensembl]....	0.04	OrthoFinder
AEA94205	OG1RF_11518	GntR family transcriptional regulator [Ensembl]. UTRA...	0.03	OrthoFinder
AKI49998	L2625_02151	transcriptional regulator, GntR family [Ensembl]. UbiC...	0.03	OrthoFinder
CRO95074	phnR_2	Putative transcriptional regulator of...	0.03	OrthoFinder
CRP78390	phnR_3	Putative transcriptional regulator of...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
MF	GO:0004107	chorismate synthase activity	IEP	Enrichment
MF	GO:0004559	alpha-mannosidase activity	IEP	Enrichment
CC	GO:0005886	plasma membrane	IEP	Enrichment
BP	GO:0006013	mannose metabolic process	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	Enrichment
MF	GO:0015225	biotin transmembrane transporter activity	IEP	Enrichment
MF	GO:0015923	mannosidase activity	IEP	Enrichment
BP	GO:0016311	dephosphorylation	IEP	Enrichment
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Enrichment
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Enrichment
MF	GO:0042887	amide transmembrane transporter activity	IEP	Enrichment
MF	GO:0090482	vitamin transmembrane transporter activity	IEP	Enrichment
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000524	Tscrpt_reg_HTH_GntR	7	68
IPR011663	UTRA	96	231

External Links

UniProtKB	U3WZQ9

CCL19531 (treR, BN171_3210004)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation