AAK99944 (spr1141, topA)

Aliases : spr1141, topA

Description : DNA topoisomerase I [Ensembl]. Toprim domain, DNA topoisomerase, Topoisomerase DNA binding C4 zinc finger [Interproscan].

Gene families : OG_02_0000393 (OrthoFinder) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAK99944
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AAC74356 topA, b1274 DNA topoisomerase I, omega subunit [Ensembl]. Toprim... 0.02 OrthoFinder
AAL20632 STM1714, topA DNA topoisomerase type I, omega protein [Ensembl].... 0.02 OrthoFinder
AHY40871 CJ8421_08495 DNA topoisomerase I [Ensembl]. Toprim domain, DNA... 0.03 OrthoFinder
CCG27509 No alias DNA topoisomerase I [Ensembl]. Toprim domain, DNA... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003916 DNA topoisomerase activity IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000921 septin ring assembly IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005940 septin ring IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
BP GO:0031106 septin ring organization IEP Enrichment
CC GO:0032156 septin cytoskeleton IEP Enrichment
BP GO:0032185 septin cytoskeleton organization IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
InterPro domains Description Start Stop
IPR006171 TOPRIM_domain 4 72
IPR013498 Topo_IA_Znf 529 563
IPR013498 Topo_IA_Znf 568 606
IPR013498 Topo_IA_Znf 608 633
IPR013497 Topo_IA_cen 86 499
No external refs found!