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Aliases : spr1533, ABC-MSP
Description : ABC transporter membrane-spanning permease-sugar transport [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0000164 (OrthoFinder) Phylogenetic Tree(s): OG0000164_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL00337 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC74393 | ycjO, b1311 | putative sugar ABC transporter permease [Ensembl].... | 0.06 | OrthoFinder | |
| AAC76477 | ugpA, b3452 | sn-glycerol-3-phosphate ABC transporter permease... | 0.03 | OrthoFinder | |
| AAL22416 | STM3556, ugpA | sn-glycerol 3-phosphate transport protein [Ensembl].... | 0.04 | OrthoFinder | |
| CCG26272 | No alias | ABC transporter, predicted N-acetylneuraminate transport... | 0.07 | OrthoFinder | |
| CCL19864 | BN171_3570013 | ABC-type transport system, sugar-family permease... | 0.05 | OrthoFinder | |
| CCP45103 | uspA, Rv2316 | Probable sugar-transport integral membrane protein ABC... | 0.02 | OrthoFinder | |
| CCP45636 | ugpA, Rv2835c | Probable Sn-glycerol-3-phosphate transport integral... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004308 | exo-alpha-sialidase activity | IEP | Enrichment |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Enrichment |
| BP | GO:0006050 | mannosamine metabolic process | IEP | Enrichment |
| BP | GO:0006051 | N-acetylmannosamine metabolic process | IEP | Enrichment |
| BP | GO:0006766 | vitamin metabolic process | IEP | Enrichment |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Enrichment |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
| MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | Enrichment |
| MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | Enrichment |
| MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEP | Enrichment |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Enrichment |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Enrichment |
| MF | GO:0016997 | alpha-sialidase activity | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Enrichment |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000515 | MetI-like | 82 | 283 |
| No external refs found! |