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  5. AAL00492

AAL00492 (spr1689, rluB)


Aliases : spr1689, rluB

Description : Ribosomal large subunit pseudouridine synthase B [Ensembl]. S4 domain, RNA pseudouridylate synthase [Interproscan].


Gene families : OG_02_0000058 (OrthoFinder) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL00492
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAC74351 rluB, b1269 23S rRNA pseudouridine(2605) synthase [Ensembl]. S4... 0.04 OrthoFinder
AAL20637 STM1719, yciL putative ribosomal large subunit pseudouridine synthase... 0.03 OrthoFinder
AEA93088 rsuA, OG1RF_10401 ribosomal small subunit pseudouridine synthase A... 0.05 OrthoFinder
AHY40894 CJ8421_08610 putative ribosomal pseudouridine synthase [Ensembl]. S4... 0.04 OrthoFinder
AKI49944 rluB, L2625_02096 ribosomal large subunit pseudouridine synthase B... 0.05 OrthoFinder
AKP14134 rluB, WX61_00045 Ribosomal large subunit pseudouridine synthase B... 0.02 OrthoFinder
CCG27711 No alias Ribosomal large subunit pseudouridine synthase B... 0.07 OrthoFinder
CPC79209 rluB, ERS093114_01325 Ribosomal large subunit pseudouridine synthase B... 0.06 OrthoFinder
CPD29064 rsuA, ERS093114_02486 16S pseudouridine synthase A [Ensembl]. S4 domain, RNA... 0.06 OrthoFinder
EDJ90671 CGSHi22421_04158 predicted methyltransferase [Ensembl]. S4 domain, RNA... 0.05 OrthoFinder
KNA51668 VCV51_031493 RNA pseudouridylate synthase [Ensembl]. S4 domain, RNA... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030975 thiamine binding IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 1 47
IPR006145 PsdUridine_synth_RsuA/RluA 61 195
No external refs found!