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  5. CCG26162

CCG26162


Description : COG0488: ATPase components of ABC transporters with duplicated ATPase domains [Ensembl]. ABC transporter C-terminal domain [Interproscan].


Gene families : OG_02_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26162
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73907 ybiT, b0820 ABC-F family putative regulatory ATPase [Ensembl]. ABC... 0.06 OrthoFinder
AAC74035 uup, b0949 replication regulatory ABC-F family DNA-binding ATPase... 0.04 OrthoFinder
AAC77344 ettA, b4391 energy-dependent translational throttle A [Ensembl]. ABC... 0.04 OrthoFinder
AAK99482 spr0678, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.06 OrthoFinder
AAK99825 spr1021, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.05 OrthoFinder
AAL00216 spr1412, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.05 OrthoFinder
AAL19774 STM0838, ybiT putative ATPase component of ABC transporter with... 0.09 OrthoFinder
AAL19995 STM1062, uup putative ATPase component of ABC transporter [Ensembl].... 0.04 OrthoFinder
AGT22228 N559_0416 putative ABC transporter ATP-binding protein [Ensembl].... 0.04 OrthoFinder
AGT24961 N559_3303 ABC transporter ATPase component [Ensembl]. ABC... 0.05 OrthoFinder
AGT25131 N559_3480 putative transport system ATP-binding component... 0.04 OrthoFinder
AHY40102 CJ8421_04395 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AKI49428 L2625_01529 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.08 OrthoFinder
AKI50068 L2625_02223 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder
AKP16088 uup_1, WX61_02062 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.04 OrthoFinder
AKP16180 uup_2, WX61_02156 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.04 OrthoFinder
CCL16955 BN171_1030005 ABC-type transport system, ATP-binding protein... 0.04 OrthoFinder
CCL18408 BN171_2290013 ABC-type transport system, ATP-binding protein... 0.04 OrthoFinder
CCP45271 Rv2477c Probable macrolide-transport ATP-binding protein ABC... 0.02 OrthoFinder
CPC31994 yheS_1, ERS093114_00026 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
CRN86127 yheS_1 putative ABC transporter ATP-binding protein YheS... 0.05 OrthoFinder
CRO90899 uup ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.04 OrthoFinder
CRP46393 yheS_2 putative ABC transporter ATP-binding protein YheS... 0.04 OrthoFinder
EDJ91009 CGSHi22421_02766 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
KNA55290 VCV51_033103 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
KNA57470 VCV51_030455 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
BP GO:0000921 septin ring assembly IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005940 septin ring IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0031106 septin ring organization IEP Enrichment
CC GO:0032156 septin cytoskeleton IEP Enrichment
BP GO:0032185 septin cytoskeleton organization IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR032524 ABC_tran_C 556 621
IPR032781 ABC_tran_Xtn 223 295
IPR003439 ABC_transporter-like_ATP-bd 20 184
IPR003439 ABC_transporter-like_ATP-bd 333 466
No external refs found!