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  5. CCL19656

CCL19656 (BN171_3350005)


Aliases : BN171_3350005

Description : Two-component response regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19656
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.06 OrthoFinder
AAL20028 STM1096, copR Copper resistance transcriptional regulatory protein... 0.03 OrthoFinder
AAL21035 STM2131, baeR response regulator in two-component regulatory system... 0.04 OrthoFinder
AAL22051 STM3177, ygiX putative transcriptional regulator [Ensembl]. Response... 0.04 OrthoFinder
AEA95261 OG1RF_12574 response regulator [Ensembl]. Response regulator... 0.03 OrthoFinder
CBI67093 HPB8_1536 two-component system, OmpR family, response regulator... 0.02 OrthoFinder
CCG27642 No alias Two-component response regulator SA14-24 [Ensembl].... 0.03 OrthoFinder
CCL16989 BN171_1060003 Two-component response regulator [Ensembl]. Response... 0.06 OrthoFinder
CCL20055 BN171_3670038 Two-component response regulator, CheY family [Ensembl].... 0.05 OrthoFinder
CCP43784 trcR, Rv1033c Two component transcriptional regulator TrcR [Ensembl].... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.04 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.05 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.06 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.03 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.04 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.05 OrthoFinder
KNA54887 VCV51_031804 response regulator receiver domain-containing protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 4 113
IPR001867 OmpR/PhoB-type_DNA-bd 148 219
UniProtKB U3X031