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  5. CCG26410

CCG26410


Description : ABC-type polar amino acid transport system,ATPase component [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26410
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73753 gltL, b0652 glutamate/aspartate ABC transporter ATPase [Ensembl].... 0.05 OrthoFinder
AAC74984 tcyN, b1917 putative ABC transporter ATPase [Ensembl]. ABC... 0.05 OrthoFinder
AAC75366 hisP, b2306 histidine ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAC75724 proV, b2677 glycine betaine/proline ABC transporter periplasmic... 0.03 OrthoFinder
AAK99212 spr0408, glnQ ABC transporter ATP-binding protein-glutamine [Ensembl].... 0.07 OrthoFinder
AAL00827 spr2025, ABC-NBP ABC transporter ATP-binding protein-unknown substrate... 0.04 OrthoFinder
AAL00828 spr2026, stpA ABC transporter ATP-binding protein-unknown substrate... 0.04 OrthoFinder
AAL19465 STM0511, sfbB putative ABC-type transport system ATPase component/cell... 0.03 OrthoFinder
AAL19613 STM0662, gltL glutamate/aspartate transporter [Ensembl]. ABC... 0.04 OrthoFinder
AAL19826 STM0891, artP arginine transport system [Ensembl]. ABC transporter... 0.02 OrthoFinder
AAL21252 STM2351, hisP histidine and lysine/arginine/ornithine transport... 0.03 OrthoFinder
AAL21694 STM2809, proV glycine/betaine/proline transport protein [Ensembl]. CBS... 0.03 OrthoFinder
ADK86794 MPNE_0223 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder
ADK86833 MPNE_0222 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.06 OrthoFinder
AEA93225 OG1RF_10538 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AEA93585 OG1RF_10898 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AEA94605 metN, OG1RF_11918 ABC superfamily ATP binding cassette transporter, ABC... 0.08 OrthoFinder
AGT24332 N559_2656 D-and L-methionine ABC transporter ATP-binding protein [Ensembl]. 0.04 OrthoFinder
AGT24560 N559_2893 ABC transporter, ATP-binding protein [Ensembl]. NIL... 0.03 OrthoFinder
AGT25285 N559_3643 ATP-binding protein of glutamate/aspartate transport... 0.05 OrthoFinder
AGT25742 N559_4116 glutamate/aspartate transport system ATP-binding... 0.04 OrthoFinder
AKI48796 glnQ, L2625_00869 glutamine ABC transporter, ATP-binding protein... 0.04 OrthoFinder
AKI50249 L2625_02416 amino acid ABC transporter, ATP-binding protein... 0.04 OrthoFinder
AKI50280 hisP, L2625_02448 polar amino acid ABC transporter, ATP-binding protein... 0.04 OrthoFinder
AKP14952 glnQ_1, WX61_00886 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.04 OrthoFinder
AKP15749 tcyC, WX61_01714 L-cystine import ATP-binding protein TcyC [Ensembl]. ABC... 0.04 OrthoFinder
CBI67198 metN, HPB8_1641 D-methionine transport system ATP-binding protein... 0.03 OrthoFinder
CPD19941 tcyC, ERS093114_02273 amino acid ABC transporter%2C ATP-binding protein... 0.03 OrthoFinder
CPD30941 glnQ, ERS093114_02522 Glutamine transport ATP-binding protein glnQ [Ensembl].... 0.01 OrthoFinder
CRO39434 glnQ_1 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.03 OrthoFinder
CRP72682 metN_4 Methionine import ATP-binding protein MetN [Ensembl].... 0.05 OrthoFinder
EDJ90253 CGSHi22421_06419 probable D-methionine transport ATP-binding protein... 0.03 OrthoFinder
EDJ90907 CGSHi22421_03623 predicted ABC-type cobalt transport system, ATPase... 0.03 OrthoFinder
EDJ91873 CGSHi22421_08958 probable amino-acid ABC transporter ATP-binding protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008239 dipeptidyl-peptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 18 162
No external refs found!