CCG27087

Description : putative ATP-dependent Clp proteinase (ATP-binding subunit) [Ensembl]. C-terminal, AAA lid domain, AAA domain (Cdc48 subfamily), ATPase family associated with various cellular activities (AAA) [Interproscan].

Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCG27087
Cluster	HCAA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AAC75641	clpB, b2592	protein disaggregation chaperone [Ensembl]. C-terminal,...	0.11	OrthoFinder
AAL19881	STM0945, clpA	ATP-binding subunit of serine protease [Ensembl]....	0.02	OrthoFinder
AAL21550	STM2660, clpB	ATP-dependent protease [Ensembl]. C-terminal, AAA lid...	0.07	OrthoFinder
ADK87250	clpB, MPNE_0627	chaperone protein ClpB [Ensembl]. AAA lid domain, ATPase...	0.03	OrthoFinder
AEA93131	clpE, OG1RF_10444	ATP-dependent Clp protease [Ensembl]. C-terminal, AAA...	0.04	OrthoFinder
AEA94480	clpB, OG1RF_11793	chaperone protein ClpB [Ensembl]. C-terminal, AAA lid...	0.04	OrthoFinder
AGT23103	N559_1341	protein disaggregation chaperone [Ensembl]. D2-small...	0.05	OrthoFinder
AHY39751	CJ8421_02500	ATP-dependent chaperone protein ClpB [Ensembl]....	0.05	OrthoFinder
AKI48945	clpE, L2625_01027	ATP-dependent Clp protease, ATP-binding subunit...	0.04	OrthoFinder
AKI50204	clpB, L2625_02371	ATP-dependent Clp protease, ATP-binding subunit...	0.03	OrthoFinder
CBI66855	clpB, HPB8_1298	ATP-dependent Clp protease ATP-binding subunit ClpB...	0.03	OrthoFinder
CCP43114	clpB, Rv0384c	Probable endopeptidase ATP binding protein (chain B)...	0.03	OrthoFinder
CPC44266	clpB_1, ERS093114_00454	chaperone protein ClpB [Ensembl]. C-terminal, AAA lid...	0.06	OrthoFinder
CPC57876	clpC, ERS093114_00855	endopeptidase Clp ATP-binding subunit C [Ensembl]....	0.11	OrthoFinder
CPC63736	clpL, ERS093114_00917	putative ATP-dependent protease ATP-binding subunit ClpL...	0.03	OrthoFinder
CRN66395	clpB_1	Heat shock protein F84.1 [Ensembl]. C-terminal, AAA lid...	0.04	OrthoFinder
CRP71014	clpC_3	ATP-dependent Clp protease ATP-binding subunit ClpC...	0.03	OrthoFinder
EDJ91635	CGSHi22421_07768	hypothetical protein [Ensembl]. C-terminal, AAA lid...	0.07	OrthoFinder
KNA57481	VCV51_030464, ClpB	ATP-dependent chaperone ClpB [Ensembl]. C-terminal, AAA...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004784	superoxide dismutase activity	IEP	Enrichment
BP	GO:0006801	superoxide metabolic process	IEP	Enrichment
BP	GO:0006812	cation transport	IEP	Enrichment
BP	GO:0006873	cellular ion homeostasis	IEP	Enrichment
BP	GO:0006875	cellular metal ion homeostasis	IEP	Enrichment
BP	GO:0006879	cellular iron ion homeostasis	IEP	Enrichment
MF	GO:0008998	ribonucleoside-triphosphate reductase activity	IEP	Enrichment
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
BP	GO:0030003	cellular cation homeostasis	IEP	Enrichment
MF	GO:0031072	heat shock protein binding	IEP	Enrichment
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Enrichment
BP	GO:0048878	chemical homeostasis	IEP	Enrichment
BP	GO:0050801	ion homeostasis	IEP	Enrichment
BP	GO:0055065	metal ion homeostasis	IEP	Enrichment
BP	GO:0055072	iron ion homeostasis	IEP	Enrichment
BP	GO:0055076	transition metal ion homeostasis	IEP	Enrichment
BP	GO:0055080	cation homeostasis	IEP	Enrichment
BP	GO:0055082	cellular chemical homeostasis	IEP	Enrichment
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Enrichment
BP	GO:0098771	inorganic ion homeostasis	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR019489	Clp_ATPase_C	607	678
IPR003959	ATPase_AAA_core	443	600
IPR003959	ATPase_AAA_core	118	250
IPR041546	ClpA/ClpB_AAA_lid	259	355

External Links

No external refs found!

CCG27087

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation