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  5. CCG27185

CCG27185 (YqfR)


Aliases : YqfR

Description : ATP-dependent RNA helicase YqfR [Ensembl]. DEAD/DEAH box helicase, Helicase conserved C-terminal domain [Interproscan].


Gene families : OG_02_0000033 (OrthoFinder) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27185
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC75629 srmB, b2576 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
AAC76196 deaD, b3162 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
AAK99474 spr0670, rheB ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder
AAL21537 STM2643, srmB ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
AKI49240 dbpA, L2625_01332 ATP-dependent RNA helicase [Ensembl]. Helicase,... 0.04 OrthoFinder
AKI49447 L2625_01548 ATP-dependent RNA helicase, putative [Ensembl].... 0.05 OrthoFinder
CBI66873 deaD, HPB8_1316 putative helicase [Ensembl]. DEAD/DEAH box helicase,... 0.04 OrthoFinder
CCL16938 BN171_1020005 Putative ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH... 0.04 OrthoFinder
CCP46027 rhlE, Rv3211 Probable ATP-dependent RNA helicase RhlE [Ensembl].... 0.02 OrthoFinder
CRO88221 rhlE_2 ATP-dependent RNA helicase RhlE [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
EDJ90863 CGSHi22421_05540 preprotein translocase subunit SecF [Ensembl]. DEAD/DEAH... 0.05 OrthoFinder
EDJ91675 CGSHi22421_07968 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
KNA55003 VCV51_031733 DEAD/DEAH box helicase [Ensembl]. DEAD/DEAH box... 0.06 OrthoFinder
KNA57620 VCV51_030433 DEAD/DEAH box helicase [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 229 337
IPR011545 DEAD/DEAH_box_helicase_dom 25 191
No external refs found!