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  5. CCG27383

CCG27383


Description : SSU ribosomal protein S19p (S15e) [Ensembl]. Ribosomal protein S19 [Interproscan].


Gene families : OG_02_0000486 (OrthoFinder) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27383
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC76341 rpsS, b3316 30S ribosomal subunit protein S19 [Ensembl]. Ribosomal... 0.23 OrthoFinder
AAK98996 spr0192, rpsS 30S Ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
AAL22299 STM3436, rpsS 30S ribosomal subunit protein S19 [Ensembl]. Ribosomal... 0.24 OrthoFinder
ADK87264 rpsS, MPNE_0198 ribosomal protein S19 [Ensembl]. Ribosomal protein S19... 0.13 OrthoFinder
AEA92842 rpsS, OG1RF_10155 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
AHY40888 rpsS, CJ8421_08580 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
AKI50563 rpsS, L2625_02773 ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AKP15127 rpsS, WX61_01073 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
CBI65721 rpsS, HPB8_164 small subunit ribosomal protein S19 [Ensembl]. Ribosomal... 0.16 OrthoFinder
CCL20567 rpsS, BN171_70007 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
CCP43449 rpsS, Rv0705 30S ribosomal protein S19 RpsS [Ensembl]. Ribosomal... 0.11 OrthoFinder
CPD13636 rpsS, ERS093114_02126 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
CRO73874 rpsS 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
EDJ91358 CGSHi22421_04623 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
KNA54976 VCV51_033159 ribosomal protein S19 [Ensembl]. Ribosomal protein S19... 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 3 83
No external refs found!