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  5. CCG27394

CCG27394


Description : LSU ribosomal protein L6p (L9e) [Ensembl]. Ribosomal protein L6 [Interproscan].


Gene families : OG_02_0000395 (OrthoFinder) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27394
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC76330 rplF, b3305 50S ribosomal subunit protein L6 [Ensembl]. Ribosomal... 0.21 OrthoFinder
AAK99008 spr0204, rplF 50S Ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.18 OrthoFinder
AAL22288 STM3425, rplF 50S ribosomal subunit protein L6 [Ensembl]. Ribosomal... 0.18 OrthoFinder
ADK87044 rplF, MPNE_0209 ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.12 OrthoFinder
AEA92853 rplF, OG1RF_10166 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.16 OrthoFinder
AGT22257 N559_0449 50S ribosomal protein L6 [Ensembl]. alpha-beta domain... 0.08 OrthoFinder
AHY40877 rplF, CJ8421_08525 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.17 OrthoFinder
AKI50552 rplF, L2625_02762 ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.16 OrthoFinder
AKP15138 rplF, WX61_01084 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.08 OrthoFinder
CBI65732 rplF, HPB8_175 large subunit ribosomal protein L6 [Ensembl]. Ribosomal... 0.09 OrthoFinder
CCL20578 rplF, BN171_70018 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.15 OrthoFinder
CCP43463 rplF, Rv0719 50S ribosomal protein L6 RplF [Ensembl]. Ribosomal... 0.07 OrthoFinder
CPD14024 rplF, ERS093114_02137 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.18 OrthoFinder
CRO74186 rplF 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.14 OrthoFinder
EDJ91371 rplF, CGSHi22421_04688 50S ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.18 OrthoFinder
KNA54987 VCV51_033170 ribosomal protein L6 [Ensembl]. Ribosomal protein L6... 0.15 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016866 intramolecular transferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR020040 Ribosomal_L6_a/b-dom 12 82
IPR020040 Ribosomal_L6_a/b-dom 91 164
No external refs found!